Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01357 ATGAAGTTTCAACTTAAACTTGCAGCTGTTCTTGCTATTAGCTTGCTATGGATTCAGCACTCATTTTGTGGATTACCTTCTGAGACTTACCTAAACAAGTGGAAATGTAGATGTTCTTCTTTCCAAAGGAACCATATATACTCTCTTTCTAATTGTTCTCACTCATGTGATTGCCATTCAGATGCTGAAGATAGTGAATCCTCATGGACATGCATATGTGATACCAATGGATTCCCTAAAGTGGCAGCAGGTGGCCATAGCTCTAGTTGCTTTAAATCCTGCAACTGCACCTGGGGAAGCAAAAGCGTTGCATTAGGTTCAAAGAAACACATTTCAACAAGGACTGTGATAGTAGTTGTGCTTTTAATATGTGTTGTATGCAGCACTCTTGCATTTATTGCCTCAGTTCTATACTATGTCTGCAAAAGAGACAGCTGTTCAATTCAATCACCAATGGTTTTATCAGATAAAGAAATAAGTTACAATAGTACCTCCAACTTAATTAGTCATAGAACATTTTCAGTTCCAGAAACAAAAGCTGCTATTCATTTTCCAGTGAGTCATATTGCAGGATGCTTTCAGAAGGCCTCTTTCTTGTTTGGGAGCCATAGAGAAACTTTTCATGGAAGTATCATTCGATTTTCGTTCTCTGAGCTGGAAAATGCCACTGGAAACTTCTCAACTTCCAACATAATTGGACTTGGTGGATGTAGTTATGTATACCGCGGACGACTTAAAGATGGAAGTAACGTGGCAGTTAAGCGATTAAAAGATGAAGGAGGACCTGAAGCAGACACTGAATTTTTCACTGAGATTGAACTATTGTCTAGGCTTCATCATTGTCATCTGGTGCCATTGCTTGGATACTGCTCAGAATTAAAAGGGAAAAATGTTCATAGGTTACTAGTGTTTGAGTACATGCCTAATGGGAATTTGAGGGACCGTTTGGATGGAGTTTTTGGAAAGAACATGGGTTGGTCTACTCGGGTAAATATCGCATTGGGAGCTGCCAGGGGTTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTGCATAGAGATGTCAAATCAACCAACATTCTTCTTGATGAAAATTGGCATGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGATAGCTGATGACATACTCAGTTGTCCTGGCTCTCCAGAGAGAATGCAGGGCACATTCGGGTATTTCGCACCCGAGTATGCAATTGTTGGGAGAGCTTCTCTTGAATCTGATGTATTTAGTTTTGGTGTGGTTCTTCTTGAGCTTATCAGTGGCCAGCAACCAATCCTTAGATCAGCAGGCAGAGAAGAAAGCCTTGTTATATGGGCCACTCCTCTCTTGCAAGATAGCAGGAGACTAATCACAGAGTTGATCGATCCGCGATTGAAAGGAAACTTCCCAGAAGAAGAGGTGAAGGTAATGGCATACTTAGCAAAAGAGTGTTTGCTGTTGGATCCTGACACAAGACCAACCATGAGTGAGGTTGTTCAAATTCTTTCAAGTATTTCCCCAGGAAAATCTAGAAGAAGAATAAGCATTCCACTTAGCCTTTTTCAGGAATCAGAGGATGCAGAGAAGGCAAGGCAAGCTTCTTCGTCGGCCAGATTCGCTTATTGTAATTTCATGTCACAAGATACTGAAAACAATCTTCATGTTGTTGGGAATGAAAATGAAAATGTAGATGCATTTTCAACTGAGTATATGGAGAGTTTGATCCTCTTGACTTCAAAAATTCCTGAGAGCTGGCATGCATCAGAAGAGGAAATGGTGATGGATCCTCCTCCTCCAAGCACACCATTGCTAGGTCAAGCTCCCCCTGATGGAGGATTCTTGGATACATGCTTATGGTTTCTGTGCTGCTGTGGTTTATTCAGTTGCTGCTTCCCTCCTCTTTATGAACCAGGACCTCCTCCTCTCTAG 1938 0.4128 MKFQLKLAAVLAISLLWIQHSFCGLPSETYLNKWKCRCSSFQRNHIYSLSNCSHSCDCHSDAEDSESSWTCICDTNGFPKVAAGGHSSSCFKSCNCTWGSKSVALGSKKHISTRTVIVVVLLICVVCSTLAFIASVLYYVCKRDSCSIQSPMVLSDKEISYNSTSNLISHRTFSVPETKAAIHFPVSHIAGCFQKASFLFGSHRETFHGSIIRFSFSELENATGNFSTSNIIGLGGCSYVYRGRLKDGSNVAVKRLKDEGGPEADTEFFTEIELLSRLHHCHLVPLLGYCSELKGKNVHRLLVFEYMPNGNLRDRLDGVFGKNMGWSTRVNIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWHAKITDLGMAKNLIADDILSCPGSPERMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGQQPILRSAGREESLVIWATPLLQDSRRLITELIDPRLKGNFPEEEVKVMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRISIPLSLFQESEDAEKARQASSSARFAYCNFMSQDTENNLHVVGNENENVDAFSTEYMESLILLTSKIPESWHASEEEMVMDPPPPSTPLLGQAPPDGGFLDTCLWFLCCCGLFSCCFPPLYEPGPPPL 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01357 645 ProSiteProfiles Protein kinase domain profile. 226 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01357 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Adu08g01357 645 PANTHER OS01G0253100 PROTEIN 2 597 IPR045271 GO:0004714|GO:0006468
Adu08g01357 645 Gene3D Phosphorylase Kinase; domain 1 201 306 - -
Adu08g01357 645 Pfam Protein kinase domain 227 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01357 645 SUPERFAMILY Protein kinase-like (PK-like) 206 505 IPR011009 -
Adu08g01357 645 CDD STKc_IRAK 232 508 - -
Adu08g01357 645 SMART serkin_6 226 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01357 645 Gene3D Transferase(Phosphotransferase) domain 1 307 519 - -
Adu08g01357 645 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01357 Adu-Chr8 22941530 22945094 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01357 1 534 Receptor kinase-like Gene Family AT2G28250 55.000 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Adu08g01357 Pkinase 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01357 - - gmx:100499641 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01357 08 22941530 22945094 Adu03g00134 03 1279287 1284897 PCT