Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01356 ATGGGTTTTGGTAATTCAAGATCTGTAAGATTTGAGGATGATCTGGAGCTACCAAATAACAAGAGTGAAAGTAAGAATGGTATGAAGGTCAAATACCACATTGATGGAACACAAATAGCAGAGGCTAGTTCCAACAAAAAGGCAGGGAATAAGTTCTTGAAAGGTAGAGTTTTATCAAGAGTGTTCTCAGAGGATTATGAGAGAGTTAAAAGAAGAAAAATAATCTTAGATCCTCGCGGCCAAGCGATCCACAGGTGGAACAAGATCTTCTTGGTGGCAAGCTTGGTGTCTTTGTTTGTGGACCCTTTGTTCTTCTACTTGCCAGTGGTTCAAGATGAAGTGTGCATTGACATTGGAGTAACACTTGAAGTTGCCCTTACTTTGATAAGAACAGTTGGTGATGCCTTCTATGTCATTCAGATTTTCGCCAAGTTTCGCACTGCTTATGTAGCTCCTTCTTCAAGAGTTTTTGGAAGAGGTGAACTTGTCATAGACACTTCCAAGATTGCAGTTAAGTACCTTTTCAAGGGATTTTGGTTAGACTTTCTTGCTGCCCTGCCTATTCCTCAGGTGCTAATTTGGATTATCATCCCAACTCTTAGGGGTTCAACCATGGCAAACACAAAGAATGTGCTTCGGTTTTTCATCATCTTCCAGTATGTTCCAAGGCTATATTTGATTTTCCCACTCTCTTCACAAATTGTAAGTGCTACTGGGGTTGTCACAGAAACAGCATGGGCTGGTGCTGCTTACAACCTCATGCTTTACATGTTGGCAAGCCATATTTTAGGAGCTTGCTGGTACCTTCTGTCAATAGAAAGGCAAGAAGCATGTTGGAGAAATGTATGCAATGTTGAGAAGCCATTTTGTGAATATGCATTCTTTGACTGCCGCAGGGTTGGAAATTCCAAAAGAGACTTATGGTTTCTAGCAAGTAACATCACAAACCTCTGCTCACCAGATTCTAACTTCTATCAGTTTGGTATATATGCTGATGCTGTCACTTCTCAAGTTACATCCTCATCATTCTTCAACAAGTACTTCTTTTGTCTTTGGTGGGGCCTTAGGAATCTCAGTTCATTGGGACAAGGCCTTCTTACTAGCACTTTTGTTGGAGAAATTATGGTTGCCATTGTTGTTGCAACACTTGGATTGGTTCTTTTTGCATTACTCATTGGTAATATGCAGACATACCTGCAATCAACTACTGTGCGGTTAGAAGAGTGGAGGGTGAAAAGAACAGACACAGAACAATGGATGCATCACAGGCAACTACCACAAGAACTTAGACAATCTGTGAGAAAATATGATCAATACAAATGGATGGCTACTAGGGGAGTTGATGAAGAAGCTCTTCTCAAAGGTCTTCCATTAGATCTTCGTAGAGACATCAAGCGCCACCTTTGTCTTGACCTTGTTCGAGGAGTACCATTGTTTGACCAAATGGATGAGAGCATGCTAGATGCAATATGTGAAAGACTAAAACCAGCATTATGCACTGAAGGAACTTACCTTGTAAGAGAAGGGGATCCAGTGAATGAAATGCTGTTCATAATAAGAGGGCACCTTGACTCTTACACAACCAATGGTGGCAGAGCTGGATTCTTCAACTCGTGCCGTATTGGGCCTGGTGATTTCTGTGGGGAGGAGCTTCTAACTTGGGCCTTGGACCCAAGGCCCAGTGTTATTCTCCCTTCTTCAACAAGAACTGTTAAGGCCTTCTCAGAAGTTGAGGCTTTTGCACTCATTGCTGAAGATCTTAAATTTGTTGCATCTCAGTTTAGAAGGCTGCATAGTAAGCAACTTAGGCACAAGTTCAGATTCTATTCACACCAATGGAGAACTTGGGCTGCATGTTTCATTCAAGCTGCTTGGAGAAGGCATAAGAAGAGAAAGGATCTTGCTGGACTAAGAGCAAAGGAGAATAATAATAATAATCATATTAATAATAATAATAATGATTATGTAACAGTTTCTGAGCCTGAGACTCCAACATCAAAGGCTGTGATGATGAGTGGTAGGAAAAGTGTTAGTAGGTCAGATTCTGGTGTAGTTAGCTCTGTGCAGAAGCCAGCTGAGCCTGACTTTTCGGTTGATGAATGA 2103 0.4132 MGFGNSRSVRFEDDLELPNNKSESKNGMKVKYHIDGTQIAEASSNKKAGNKFLKGRVLSRVFSEDYERVKRRKIILDPRGQAIHRWNKIFLVASLVSLFVDPLFFYLPVVQDEVCIDIGVTLEVALTLIRTVGDAFYVIQIFAKFRTAYVAPSSRVFGRGELVIDTSKIAVKYLFKGFWLDFLAALPIPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYVPRLYLIFPLSSQIVSATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWRNVCNVEKPFCEYAFFDCRRVGNSKRDLWFLASNITNLCSPDSNFYQFGIYADAVTSQVTSSSFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMVAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVRKYDQYKWMATRGVDEEALLKGLPLDLRRDIKRHLCLDLVRGVPLFDQMDESMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAFSEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKDLAGLRAKENNNNNHINNNNNDYVTVSEPETPTSKAVMMSGRKSVSRSDSGVVSSVQKPAEPDFSVDE 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01356 700 Pfam Ion transport protein 86 405 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu08g01356 700 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 700 - -
Adu08g01356 700 SUPERFAMILY cAMP-binding domain-like 408 604 IPR018490 -
Adu08g01356 700 MobiDBLite consensus disorder prediction 640 700 - -
Adu08g01356 700 Gene3D Jelly Rolls 476 596 IPR014710 -
Adu08g01356 700 ProSiteProfiles cAMP/cGMP binding motif profile. 478 563 IPR000595 -
Adu08g01356 700 PRINTS EAG/ELK/ERG potassium channel family signature 141 150 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu08g01356 700 PRINTS EAG/ELK/ERG potassium channel family signature 258 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu08g01356 700 PRINTS EAG/ELK/ERG potassium channel family signature 347 364 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu08g01356 700 PRINTS EAG/ELK/ERG potassium channel family signature 391 400 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu08g01356 700 PRINTS EAG/ELK/ERG potassium channel family signature 441 448 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu08g01356 700 Gene3D - 89 402 - -
Adu08g01356 700 SMART cnmp_10 478 609 IPR000595 -
Adu08g01356 700 CDD CAP_ED 478 609 IPR000595 -
Adu08g01356 700 Gene3D Helix hairpin bin 405 469 - -
Adu08g01356 700 PANTHER - 4 700 - -
Adu08g01356 700 MobiDBLite consensus disorder prediction 640 687 - -
Adu08g01356 700 SUPERFAMILY Voltage-gated potassium channels 78 400 - -
Adu08g01356 700 ProSiteProfiles IQ motif profile. 614 643 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01356 Adu-Chr8 22935746 22939133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01356 48 699 Ion Channels AT2G28260 75.767 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01356 K05391 - gmx:100786868 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01356 08 22935746 22939133 Adu08g01356 08 22935746 22939133 ECH
Adu08g01356 08 22935746 22939133 Adu03g00136 03 1297528 1301045 PCT