Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01340 ATGCGATTGCTATGGGGGATAAAGTTGCCCCTACTCATATTCATTCAACTTTTATGTCTCAGCAAATTATATGCTGAGGCTTTGTTCACTTTGAAAGGTTCACTTAGCAGATCACAGCAATTGGGATGCAGCATTGTGAAGTATCCGTGTCGAATGCAATGGCCGTGTCGCCTTAACTGCTATAAACTAAAAGATCCAGGTGGAATAGCAGCAAAGGTGGATGGAAACAATGACATTCCAACACTTACACCTGTTCAAGAAGCTCAAGTTAACAGGCAGGGTGAAAGAAGGGCTGCTGCCGCCACAGTTGGTGGCGTTGCTGCCGCCTTATTGGTGATTATCATTGTGGTAATTGTGTATATCTGCTTGATGCGTCTTAAAAGAATGATGAGGCAAACATCTGAGAGTGCTTCTTCTATGCCATCTCCCACAGTTGAGATGGGAAGAAGCAACAACTCGCTGCAAGTAAACGAACTGTGTCCATATTATGCACACAATGCAAGGCAGTTAACAATTTTAGAACTAGAACAAGCTACAAGATGTTTCAATCAAAGTAATATTGTAGGTGAAGATAGATTTGGTTTGGTTTACCAGGGCTTGCTTCAAGATGGATCTATTGTGGCTATAAAGAGGAGAATATCTTCTCTAACGACGAATTTCATCCGCGAGGTGAGGAAGATATCATGCATTCACCATATGAATCTTGTGAAGCTTATAGGCTACTATGAAGATGGCTATCAACAATTACTAGTGTATGAACATCTCCCTAATGGCCATGTAGGGAATCACCTATATGATAGTGAAGGTTTACCTATTGGAAAGTTAGACTTGTGGAGGAGGTTATCCATTGCTTTAGGAGCATCCAAAGGACTGGAACATCTTCACAGTTTGGATCCTCCTTTGGTTCACACCAATTTCAGAACTAGAAATGTTTTTTTGGATGGAAGTTACACTGCCAAGGTTTCGGATTACGGATTCGGCACATTGCAAAGAGAAGTTGATCAGGCTGCAGCCTCATCTTCATGCATAGATTGCTTTCTTGACCCAGAGTTGAGTTCACCAGAAAACTATACACAGCAGAGTGATGTATACAGCTTTGGAGTCTTTTTACTGGAGTTGATTAGTGGTTGTGAAGTTTATAACAGAAACATGTCAACCTTAGAAGAAAACCTAGTATTCCAGGCAAAGGCAAAGGCAAAGGATAGTGATGGGTTGGAGAAGTTGATTGATGTAACATTAGGAGAGCATGAAAAACATGGTGCAAGGAGAATGGTGAGGTTGGCATTGTTATGCATAAGCAAGAGTTATAGAAGGCCATCAATGGGGCAAATAGTGGAAGAGCTAGAGCGGATTCAAAGAGAGATTGCTCCTTTGTATTCACAAGTCAATGAGGACATTGGTGTCGTCACTCTTGGGAGTGAACTTTTCCAATAA 1434 0.4142 MRLLWGIKLPLLIFIQLLCLSKLYAEALFTLKGSLSRSQQLGCSIVKYPCRMQWPCRLNCYKLKDPGGIAAKVDGNNDIPTLTPVQEAQVNRQGERRAAAATVGGVAAALLVIIIVVIVYICLMRLKRMMRQTSESASSMPSPTVEMGRSNNSLQVNELCPYYAHNARQLTILELEQATRCFNQSNIVGEDRFGLVYQGLLQDGSIVAIKRRISSLTTNFIREVRKISCIHHMNLVKLIGYYEDGYQQLLVYEHLPNGHVGNHLYDSEGLPIGKLDLWRRLSIALGASKGLEHLHSLDPPLVHTNFRTRNVFLDGSYTAKVSDYGFGTLQREVDQAAASSSCIDCFLDPELSSPENYTQQSDVYSFGVFLLELISGCEVYNRNMSTLEENLVFQAKAKAKDSDGLEKLIDVTLGEHEKHGARRMVRLALLCISKSYRRPSMGQIVEELERIQREIAPLYSQVNEDIGVVTLGSELFQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01340 477 Gene3D Transferase(Phosphotransferase) domain 1 255 469 - -
Adu08g01340 477 Pfam Protein tyrosine and serine/threonine kinase 185 447 IPR001245 GO:0004672|GO:0006468
Adu08g01340 477 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 68 475 - -
Adu08g01340 477 Gene3D Phosphorylase Kinase; domain 1 144 254 - -
Adu08g01340 477 SUPERFAMILY Protein kinase-like (PK-like) 162 458 IPR011009 -
Adu08g01340 477 ProSiteProfiles Protein kinase domain profile. 182 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01340 477 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 68 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01340 Adu-Chr8 22613396 22615764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01340 106 455 Receptor kinase-like Gene Family AT4G02010 34.530 1.15e-52 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Adu08g01340 PK_Tyr_Ser-Thr 2.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01340 - - gmx:100815066 645.195