Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01322 ATGGAAATTGATCTGAACCATGCAGTGACTGAGGTTGAAAAGAATGCAACTTGCAATGGTGGCTGTCACAAAGAACAAGCAACTGCTTCTTGTGTGTGCTGTGTGCCATCATCATCATCATCATCATCGTCCACTGCTGTGTCTTCTTCTTCGTATCTGGAGCTATGGCATGCTTGTGCTGGCCCTCTTACTTCTCTCCCAAAGAAGGGGAATGTGGTTGTCTACTTCCCACAAGGGCACTTAGAGCAAGCTGCATCTTTCTCTCCCTTCACACCATTGGAGATTCCAACACATGATCTTCAACCACAGATCTTCTGTAGAGTTGTCAATGTCCAACTACTTGCCAATAAGGAGAATGATGAGGTTTACACACAGGTCACTTTGCTTCCCCAGGCTGAGTTGGCAGGGATGGGGAAAGAGCTTCTTGAGGAATTGGGAGCTGATGAAGAAGGAAATGGAAGAACACCTACAAAAACAACACCTCACATGTTCTGCAAGACACTCACAGCCTCTGATACAAGCACTCATGGTGGTTTCTCTGTTCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTATTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTACAGAGGTCAGCCGAGGCGGCATCTACTCACTACCGGATGGAGTATTTTCGTTAGCCAAAAGAATCTTGTGTCCGGTGATGCTGTGCTTTTCCTAAGGGGTGAAAATGGAGAATTGAGATTGGGAATCAGAAGAGCTGTTCGACCAAGAAATGGTCTTCCTGAGTCTATTGTTGGTAACCAGAGTTGTTATCCCAATTTCCTTTCTTCTGTGGCTAATGCTATATCAGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGGGCAAGTCATGCAGATTTTGTTGTATCCTATCAAAAGTACGCCAAAAGCATCAAGAATCCGGTGACCATTGGCACAAGATTCAAAATGAAATTTGAGATGGATGAATCACCTGAAAGAAGGTGTACTAGTGGGATAGTGACTGGAATGAGTGATTTGGATCCATACAGATGGCCTAAATCAAAATGGAGGTGCTTAATGGTCAGATGGGATGAGGATATGGAGACTAATCATCAGGATCGAGTATCTCCATGGGAGATCGATCCTTCGGCTTCTCTCCCTCCATTGAGCATGCAGTGTTCCCCAAGGCTGAAGAAACTGCGGACAGGTCTGCAGGCTGCATCATCCAGTCACCTCATCACTGGAGGCACTGGGTTTATGGACTTGGAGGAGTCTGTAAGATCGCCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCCCTATATTTTGGACGTGACACAGTAACTAAGCAGCCAGGTTTTGAGATCAGTTCTCCCAATCATCCGAATCTTGCATCGGCCGGAGCAAGAAAGATGACTGCTGCTGAGCTTATGAGGGTTCACCCTCCTACTTATGCAGGCTTTGTGGAACCTAATAATAGGTTTCCGAGGGTCTTGCAAGGTCAAGAAATATGTCCACTAAGGTCCCTGACAGGGAAGGTTGATATGAATCTCGGTGCTTGGGGTAATAAACCAAGTAGTGCAAGTTGCACAACTTTCAACCTGCATCAAGCTACCAGACCAAAATTTGATTCTTTAGGATCAGAAGTCCTTCAAACTGCATATTTTCCTTATGGTGATATTCACAAAGCTGGTCATGGTAGCAGCATGTTGTGCTCTAAACCGTCGAGTTTCCAAAGAGATATTGCGCCGTTTAACACTCCTCTGACTCAGGCAGGGATAATTAGAAATGAAATTGGAAGGTCTGGCCCTTCAATCATGCATGAGCAGAAGCTGCCGGAGAATGTTTCCGCGGTTTCTTCTTTAGGGGGAAACAGCATGAGGATGCCAGTTCCGGATGAAGAGAATCTCAAGGGGAAGATAAATGGATGTAAACTATTTGGAGTTGCCTTGTCTGGAGAAACTACCACCCAAAATGCTAAAAGGAGCTGCACAAAGGTGAGCGATGATAGGTAG 2061 0.4517 MEIDLNHAVTEVEKNATCNGGCHKEQATASCVCCVPSSSSSSSSTAVSSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQAASFSPFTPLEIPTHDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMGKELLEELGADEEGNGRTPTKTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGNQSCYPNFLSSVANAISAKSMFHVFYSPRASHADFVVSYQKYAKSIKNPVTIGTRFKMKFEMDESPERRCTSGIVTGMSDLDPYRWPKSKWRCLMVRWDEDMETNHQDRVSPWEIDPSASLPPLSMQCSPRLKKLRTGLQAASSSHLITGGTGFMDLEESVRSPKVLQGQENTGFMSLYFGRDTVTKQPGFEISSPNHPNLASAGARKMTAAELMRVHPPTYAGFVEPNNRFPRVLQGQEICPLRSLTGKVDMNLGAWGNKPSSASCTTFNLHQATRPKFDSLGSEVLQTAYFPYGDIHKAGHGSSMLCSKPSSFQRDIAPFNTPLTQAGIIRNEIGRSGPSIMHEQKLPENVSAVSSLGGNSMRMPVPDEENLKGKINGCKLFGVALSGETTTQNAKRSCTKVSDDR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01322 686 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 11 683 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu08g01322 686 PANTHER AUXIN RESPONSE FACTOR 11 683 - -
Adu08g01322 686 Gene3D - 162 266 IPR015300 -
Adu08g01322 686 Pfam Auxin response factor 290 372 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu08g01322 686 Pfam B3 DNA binding domain 164 265 IPR003340 GO:0003677
Adu08g01322 686 Gene3D - 328 400 - -
Adu08g01322 686 SMART B3_2 164 266 IPR003340 GO:0003677
Adu08g01322 686 CDD B3_DNA 162 264 IPR003340 GO:0003677
Adu08g01322 686 SUPERFAMILY DNA-binding pseudobarrel domain 156 275 IPR015300 -
Adu08g01322 686 ProSiteProfiles B3 DNA-binding domain profile. 164 266 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01322 Adu-Chr8 22445345 22450201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01322 48 682 B3 DNA Binding Superfamily AT5G60450 57.740 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu08g01322 B3 1.5e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01322 - - ahf:112706773 1359.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01322 08 22445345 22450201 Adu08g01322 08 22445345 22450201 ECH
Adu08g01322 08 22445345 22450201 Adu03g00180 03 1635046 1639895 PCT