Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01317 ATGGAGGCAAGTGACACAAATACCCCTATTTCTTCTTCTCAGTCTCCAACATCCTCATCTTCTCTTCCACCTCCGCCGCAAGTGATAATGAGTCCTTGCGCTGCTTGTAAAATTCTTCGGCGGAGGTGTGCGGAGAAATGTGTGTTGGCCCCTTATTTTCCTCCAACTGAACCTGCCAAGTTCACCACCGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTTTTGCAGGAACTTCCGGAGAGTCAAAGAGCTGATGCAGTAACAAGCATGGTTTATGAAGCAGGTGCAAGGATAAGAGATCCGGTCTACGGTTGCGCCGGCGCCATTTGCCAGCTTCAGACGCAAGTGAATGAGCTTCAAGCACAGTTAGCGAAGGCTCAAGCTGAGATTGCCAACATGCAGTTTCAACAGGCCAATATGGTGGCTCTTCTTTACATGCAAATGGCGGAGGCTAATAATAAGGCTACCGCCACCACACAAGAACCGCCACCGTCACCGCAACAATCCGTGGATAACTTCATTGCAAGCCCTCCTCACATCAACAATAATCTCAACTTCTTTGACGACAACAACACTAGCCTCAACTCCATGTGGGAGCTTTTTGGACATGACCATATCACTACGTTTTAA 636 0.4811 MEASDTNTPISSSQSPTSSSSLPPPPQVIMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRADAVTSMVYEAGARIRDPVYGCAGAICQLQTQVNELQAQLAKAQAEIANMQFQQANMVALLYMQMAEANNKATATTQEPPPSPQQSVDNFIASPPHINNNLNFFDDNNTSLNSMWELFGHDHITTF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01317 211 Coils Coil 111 138 - -
Adu08g01317 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 20 202 - -
Adu08g01317 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 20 202 - -
Adu08g01317 211 MobiDBLite consensus disorder prediction 1 26 - -
Adu08g01317 211 ProSiteProfiles LOB domain profile. 31 132 IPR004883 -
Adu08g01317 211 Pfam Lateral organ boundaries (LOB) domain 32 129 IPR004883 -
Adu08g01317 211 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01317 Adu-Chr8 22345773 22346938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01317 28 191 AS2 family AT2G28500 64.848 3.86e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu08g01317 LOB 5.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01317 - - gmx:100789504 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01317 08 22345773 22346938 Adu08g01317 08 22345773 22346938 ECH
Adu08g01317 08 22345773 22346938 Adu03g00191 03 1787823 1789890 PCT