Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01311 ATGCTTGTGCAATCTGCAGATGGGCTTCACTTCATAGAGGTGGAGAAAAACAACGATAACGTGATGCTGGTTGGTGACGGCATCAGAAGTTCTCAAGACGGTTACACAACATACAGCTCCGCAACCGCCGGCATAGATGGGCTTCACTTCATTGCAAGAGACATCACGCAAGGGCCAAGCTGTGGCCCTGAGATCCGCCTCCGACCTGTCTTTGTTCTACCAAGACACGCTCATGGCCCACGCGCAGCGCCAATTCTACAGACAGTGCTACATCTACGGCACCGTTGA 288 0.5278 MLVQSADGLHFIEVEKNNDNVMLVGDGIRSSQDGYTTYSSATAGIDGLHFIARDITQGPSCGPEIRLRPVFVLPRHAHGPRAAPILQTVLHLRHR 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01311 95 PANTHER PECTINESTERASE 12 63 - -
Adu08g01311 95 Pfam Pectinesterase 12 64 IPR000070 GO:0030599|GO:0042545
Adu08g01311 95 PANTHER PECTINESTERASE 12 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01311 Adu-Chr8 22297586 22297873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01311 12 68 Carbohydrate Esterase AT5G51490 55.072 1.14e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01311 K01051 - gmx:100816908 78.1814