Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01309 ATGAGCTCCTCAAACAAGAACACCATTAAGAATGGTGACACCCAGAACTCCCTTCATCTGGAATCGGGGTCACCAGCGCAGCCAAGTCCCATTTGGAAGCTGGTGGCGGTAGCCTCCATCGCTGCCGGTATCCAGTTTGGCTGGGCTCTACAACTCTCCCTACTAACACCTTACAGTCAGCTTCTCGGAGTGCCTCACCAATGGTCCTCTTTCATCTGGCTCTGCGGCCCCATTTCCGGCATGGTTGTCCAGCCAATAGTTGGTTACTATAGCGACCGATGTACCTCCAAACTCGGCCGCCGCCGTCCTTTCATTCTTGCCGGCGCCGCTGCTGTCGCCATAGCTGTTTTTCTCATTGGCTTTGCCGCCGATATTGGCCATGCCTTTGGGGACAACCTGAACAAGAAAACCCGCCCACGCGCCGTAGCCATATTTGTGATCGGATTCTGGATCTTGGACGTGGCCAACAACATGCTCCAGGGACCCTGTCGAGCGTTCCTGGGTGACCTTGCCGCCGGTGATGAACGGAAAACGAGGCTGGCAAACGCGTTCTTCTCGTTCTTCATGGCCGTGGGAAGCGTACTCGGTTACGGTGCGGGGTCCATTGACAGCCTCCACAAAGTGTTTCCATTCACGCAGACAAAAGCGTGCGATGTGTTCTGCGCAGACTTGAAAAGTTGCTTCTTCTTCTCGATCCTCCTACTGCTGTCGTTGACAGGTGTAGCTTTGTTCTACGTGCCGGATAAACAAGTATTACGTGAGAAGTCACCTGTGGGAGAAGAAGATGAGAGATCGGCAGCAGTTGTATGCTTCGGAGAAATGTTGGGGGCGCTAAAAGGGCTGAAGAAGCCCATGTTGCTACTAATGGCGGTTACGGCAATAAACTGGTCGGCGTGGTTTGCATATTTCTTGTACAACACTGACTGGATGGGTAAGGAGGTATATGGTGGAGAGGTTGGAAATCAAGCGTATAAAGACGGCGTCCAAAAGGGAGCTTTGGGTCTTTTGATAAATTCCGTGGTTTTGGGTGTTATGTCTTTGGGTGTGGAACCCATTGGACGTGCGGTTGGTGGTGCTAAGAATCTCTGGGGAATTGTTAATTTTGTCCTTGCGGCTGGCTTGGCCATGACTGTATATATCAGCAAGGTCGCTATGCACCAGCGTCATCTTAATCCCCACTACATTGGTCATCCCTCCACTGGCGTTCAGGCTGGAGCCTTGTCCTTTTTTGCTGTTCTAGGCATTCCTCTTGCGATAACATACAGTGTTCCATTTGCATTAGCATCCATCTATTCAAGTGAAACTGGCGCAGGACAAGGTTTATCTTTGGGAGTTCTTAATCTTGCCATTGTGGTTCCGCAGATGATAGTGGCAGCAATTAGCGGACCATGGGACAAATTATTTGGAGGTGGCAATTTGCCGGCGTTCGTGGCAGGTGCGGTGGCGGCCGCCGTGAGTGGTATAATGGCAATTTTCATGCTACCTTCTACAAAGCAATCGGAAGCGGCTAAAGCTGCTCTCCCCATTGGTGGTTTCCATTAG 1542 0.513 MSSSNKNTIKNGDTQNSLHLESGSPAQPSPIWKLVAVASIAAGIQFGWALQLSLLTPYSQLLGVPHQWSSFIWLCGPISGMVVQPIVGYYSDRCTSKLGRRRPFILAGAAAVAIAVFLIGFAADIGHAFGDNLNKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDERKTRLANAFFSFFMAVGSVLGYGAGSIDSLHKVFPFTQTKACDVFCADLKSCFFFSILLLLSLTGVALFYVPDKQVLREKSPVGEEDERSAAVVCFGEMLGALKGLKKPMLLLMAVTAINWSAWFAYFLYNTDWMGKEVYGGEVGNQAYKDGVQKGALGLLINSVVLGVMSLGVEPIGRAVGGAKNLWGIVNFVLAAGLAMTVYISKVAMHQRHLNPHYIGHPSTGVQAGALSFFAVLGIPLAITYSVPFALASIYSSETGAGQGLSLGVLNLAIVVPQMIVAAISGPWDKLFGGGNLPAFVAGAVAAAVSGIMAIFMLPSTKQSEAAKAALPIGGFH 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01309 513 MobiDBLite consensus disorder prediction 1 24 - -
Adu08g01309 513 PANTHER SUGAR TRANSPORTER 15 501 - -
Adu08g01309 513 SUPERFAMILY MFS general substrate transporter 34 500 IPR036259 -
Adu08g01309 513 CDD MFS_SLC45_SUC 34 492 - -
Adu08g01309 513 Gene3D MFS general substrate transporter like domains 27 503 IPR036259 -
Adu08g01309 513 MobiDBLite consensus disorder prediction 1 26 - -
Adu08g01309 513 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 15 501 - -
Adu08g01309 513 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 499 IPR005989 GO:0005887|GO:0008515|GO:0015770
Adu08g01309 513 Pfam MFS/sugar transport protein 46 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01309 Adu-Chr8 22261622 22264211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01309 15 513 Sucrose Transporter Gene Family AT1G71890 62.992 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01309 K15378 - gmx:100784153 687.567