Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01303 ATGTTCGATCTTAACCTGAATGCCGATTCCACTCAGCACGATGACTCGCCCGTGCTGCTCGGGGAGAAGATTCCGGAAGCGTCCTCCGGGACCTCGAATTCCTCCGTGGTGAATGCGGAGGGTTCGAGCAACGGAGGTGGTGCCGGAGACGACGACTCGTGTTCCACACGCGCCACTGGTAGCGGCGATGTGTACACCTTCAATTTCGATATTCTGAAGGTGGAAGGCGGGAGCGACAACTCCGTCGCGACGAAGGAACTGTTTCCGGTGAGCGCCGGGAACTGGCAGGGGCAGGCTTCGACGTCGTCGATTCCGGCGAGGAAGAGCTGGATGGATCTGTCGCTGGATCAGCATCGAGGTGAAAGCGCGGAGAAGCAGCAGCAACAGCAACAACAGCCTCCGCAAGCGAAGAAGAGTAGGAGGGGCCCACGCTCAAGGAGCTCGCAGTACAGAGGTGTCACCTTCTACAGGAGGACCGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTTTATTTGGGTGGATTTGACACCGCTCATGCCGCTGCTAGAGCTTATGATCGAGCTGCTATCAAGTTTAGGGGACTTGATGCTGACATCAATTTTAATCTCGTTGACTATGAGGACGATCTCAAACAGATGAAAAATCTCTCCAAGGAGGAATTTGTTCACATACTCCGTCGCCAAAGCACTGGTTTCTCAAGAGGAAGTTCAAAATACCGAGGAGTGACACTTCACAAATGTGGCCGGTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAAGCAGCTATCAAATGCAATGGAAGAGAGGCAGTCACTAACTTCGAGCCAAGTACGTATGAAAGCGAGGTCAAAACTGAAGCCATTAGTGAAGGTGGCAGTCACAACCTTGACCTCAATTTAGGCATGGCTACCCCAGGACATGATCCCAAAGAAAACAGGGGGAATCTTCAGTTCCAGTCTGTCCCTTACGATGTGCATCCCGGAAGAAGTTCGAGGGTATATAGCTGA 1077 0.5181 MFDLNLNADSTQHDDSPVLLGEKIPEASSGTSNSSVVNAEGSSNGGGAGDDDSCSTRATGSGDVYTFNFDILKVEGGSDNSVATKELFPVSAGNWQGQASTSSIPARKSWMDLSLDQHRGESAEKQQQQQQQPPQAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLVDYEDDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYESEVKTEAISEGGSHNLDLNLGMATPGHDPKENRGNLQFQSVPYDVHPGRSSRVYS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01303 358 Pfam AP2 domain 240 290 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 Pfam AP2 domain 149 197 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 Gene3D AP2/ERF domain 148 207 IPR036955 GO:0003700|GO:0006355
Adu08g01303 358 Gene3D AP2/ERF domain 240 299 IPR036955 GO:0003700|GO:0006355
Adu08g01303 358 ProSiteProfiles AP2/ERF domain profile. 149 205 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 CDD AP2 149 204 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 MobiDBLite consensus disorder prediction 124 138 - -
Adu08g01303 358 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 337 - -
Adu08g01303 358 MobiDBLite consensus disorder prediction 1 55 - -
Adu08g01303 358 SMART rav1_2 149 211 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 SMART rav1_2 241 304 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 337 - -
Adu08g01303 358 MobiDBLite consensus disorder prediction 313 358 - -
Adu08g01303 358 PRINTS Ethylene responsive element binding protein signature 242 253 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 PRINTS Ethylene responsive element binding protein signature 280 300 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 CDD AP2 240 300 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 SUPERFAMILY DNA-binding domain 148 205 IPR016177 GO:0003677
Adu08g01303 358 ProSiteProfiles AP2/ERF domain profile. 241 298 IPR001471 GO:0003700|GO:0006355
Adu08g01303 358 SUPERFAMILY DNA-binding domain 240 299 IPR016177 GO:0003677
Adu08g01303 358 MobiDBLite consensus disorder prediction 117 150 - -
Adu08g01303 358 MobiDBLite consensus disorder prediction 26 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01303 Adu-Chr8 22156363 22160599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01303 79 324 AP2-EREBP Transcription Factor Family AT4G36920 69.531 1.82e-100 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Adu08g01303 AP2 1.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01303 K09284 - gmx:100777102 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01303 08 22156363 22160599 Adu08g01303 08 22156363 22160599 ECH
Adu08g01303 08 22156363 22160599 Adu03g00203 03 1944718 1948490 PCT