Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01281 ATGGGGGGTCCAACTGTCTCCTCTGGTAATGACACTCTTCAGCGAACCTGGGATCCGGATCTTAGCTTCCTAAAAGAAAAAAACCTTGCTGCTAATTTCTCAAATATTGGAGGTGTTCAATATGTGAACGGCTCGGCTACTGAAAATGATGCTCCGGCTAGTGTTTATGGTACTGGACAACAGATGAACTCACAAAGTGATCCACGTGTTAATTTCAATGTGACATGGGAGTTTAAGGTGGATTCTGGATTTCAGTACCTTGTTAGACTTCACTTCTGTGATTTAGTGAGTAAAGGTCTCAATGAACTCTACTTCAATGTTTATGTTGATTCCTTGTTTGCTGCCAAGGATCTTGATCTTGCTTCAATAAATCAAAATGTCTTGGGTGTTCCATATTATAGGGATGTTGTTACACCCTTGACATCTAGCAACTTGCTTCGAGTAAGTATGGGACCTTCTAATGTAAATAAGGACTACCCTAATGCCATTCTGAATGGTTTGGAGATCATGAAAATGAACAATTCTGTGGGAAGTCTTAGTACAGGGACAGCTGCTGTTGCTACTACTTCTGGTTCAAATTCAAAGAATGTTGGTGTAATTGTGGGTGCAGTTCTTGGGGCAGTATGTGCAGTGGTCTTGGCTGGACTTTTGTGTTTACTATGCAGGAAAAGAAGGCGGTTGGCGCGGCGGAGACAGTCGAAGACATGGATTCCTTTCTCCATCAATGGCACAACTTCTCACACCATGGGAAGTAAATATTCTAATGGTACTACAATTAGTGCTGCTTCAAACTTCGAGTACCGTGTTCCTCTTGCTGCAGTTCAGGAAGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGGATTGGTGGCTTTGGGAAAGTATACAAGGGGGAATTGAGTGATGGCACTAAAGTGGCAGTTAAGAGAGGAAATCCTCGGTCACAGCAGGGTATTGCCGAGTTCCGAACTGAAATCGAAATGCTGTCTCAGTTCCGTCACCGGCATCTGGTATCTTTGATCGGCTATTGTGATGAAAGGAATGAAATGATACTGATATATGAGTATATGGAGAAAGGAACACTCAAGGGTCATCTATATGGTTCGGGGTTCCCAACCTTAAGTTGGAAGGAGAGGCTTGAgatatgcattggagctgctagagggcttcattatctgcacaccggctatgctaaagcagttattcaccgcgatgtgaaatctgcaaatatcctccttgatgagaacctgatggctaaagttgctgattttggattATCCAAGACTGGGCCAGAACTTGATCAGACACATGTGAGCACAGCTGTTAAAGGAAGCTTTGGCTACCTTGATCCTGAATACTTCAGGAGGCAGCAGCTAACAGAAAAGTCTGATGTGTATTCATTCGGCGTGGTTCTGTTTGAAGTTCTTTGTGCAAGACCTGTCATAGATCCGTCCCTTCCCAGGGAGATGGTAAACTTGGCAGAATGGGCAATGAAGTGGCAGAAGAAGGGGCAATTGGAGGAGATCATAGATCCTGCACTTGCAAGCAACATAAGACCGGAATCTCTCAGGAAGTTTGGAGAAACCGCGGAGAAATGCTTGGCAGACTTCGGTGTAGACAGGCCTTCTATGGGAGATGTATTGTGGAATTTGGAGTATGCCCTGCAGCTTCAAGAGTCTGCTACTCAAGGGAATGATCCTCAAGAAAACAGTACTAATATGATCAGTCTCTCTCCACAGGTCAACAACTTCAACAACGATGCAAGCGCCTCTGCCATTAAATTTGAAGGCACAAATGTGGATGATCTGTCTGGTGTTTCAATGAGTAGGGTGTTCTCTCAGTTGGTGAAGTCAGAGGGGAGATGA 1866 0.4089 MGGPTVSSGNDTLQRTWDPDLSFLKEKNLAANFSNIGGVQYVNGSATENDAPASVYGTGQQMNSQSDPRVNFNVTWEFKVDSGFQYLVRLHFCDLVSKGLNELYFNVYVDSLFAAKDLDLASINQNVLGVPYYRDVVTPLTSSNLLRVSMGPSNVNKDYPNAILNGLEIMKMNNSVGSLSTGTAAVATTSGSNSKNVGVIVGAVLGAVCAVVLAGLLCLLCRKRRRLARRRQSKTWIPFSINGTTSHTMGSKYSNGTTISAASNFEYRVPLAAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGIAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKGHLYGSGFPTLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEEIIDPALASNIRPESLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQESATQGNDPQENSTNMISLSPQVNNFNNDASASAIKFEGTNVDDLSGVSMSRVFSQLVKSEGR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01281 621 Pfam Protein tyrosine and serine/threonine kinase 286 480 IPR001245 GO:0004672|GO:0006468
Adu08g01281 621 Pfam Malectin-like domain 6 172 IPR024788 -
Adu08g01281 621 ProSiteProfiles Protein kinase domain profile. 281 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01281 621 Gene3D Transferase(Phosphotransferase) domain 1 357 578 - -
Adu08g01281 621 PANTHER OS07G0166700 PROTEIN 1 589 IPR045272 GO:0004714|GO:0006468
Adu08g01281 621 CDD STKc_IRAK 287 552 - -
Adu08g01281 621 Gene3D - 1 174 - -
Adu08g01281 621 Gene3D Phosphorylase Kinase; domain 1 242 356 - -
Adu08g01281 621 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 1 589 - -
Adu08g01281 621 SUPERFAMILY Protein kinase-like (PK-like) 258 552 IPR011009 -
Adu08g01281 621 SMART serkin_6 281 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01281 621 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Adu08g01281 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01281 Adu-Chr8 21835653 21838653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01281 1 621 Receptor kinase-like Gene Family AT3G46290 70.906 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu08g01281 PK_Tyr_Ser-Thr 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01281 - - gmx:100305416 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01281 08 21835653 21838653 Adu03g00216 03 2097638 2100156 PCT