Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01274 ATGGTTCTTAGAAAGGGATTGCTCATCGTTAACCACCAGGAGGGTTCTAACTGGGAAACATCGTTAAGTATGGAAAACGCTCGCACCATCATAGCCAAATGGGACCCACTTCCCAACGGCAGCGAAAACAAAGACTCAACTCCTTTCTTCACTAACACGCGCCAGGAAGCCAAACGGTACCTTAACGCCGTTTCAAATCTACATTCCGCTATGCAACACCTCCTCACACTGGATTCTTCCTCGGACCGGCTCGTCGAGGCTTGTTCCCTGATGCAAGTCGCCATGAACAGGCTCGAGAGAGAGTTATATCGTGTATCAGCTGAGATTAGGGACCATGTTGACGATGATAATATTCGCCATGCTGCTGCCAAGGAGGATTTGAAGGCAATCGTGGAGTGTATGTTCTTCGCTGGATATGGCAAAGAGTGCGTCCAGATTTACACCAAGGTCAGAAAGTCCAATGTCACTGAGGCACTGCAGAATCTCGGAGTGGAAAAGCCTAGGCTCTCTAAGATGAAGAAGATGCAATGGGAGATGTTCGATTTTAAGATCAAGACCTGGCTCAACGCCGTCAAATTCGCCGTCGGAGCTCTGTTTCCCGGCGAGAGGAGTCTCATTAACCAAATCTTTCCCTCTTCGGAGAACACGACCGTAGTCGAGTCCTGCTTCGCGGAGATTTGCAAAGACGGTGCCGAAATGTTGTTTCTGTTCCCTGAAATCATAGCAAAGTGCGAGAAAACGCCGGAGAAAATGTTCCGACTACTCGATCTCTACGAAGCACTCTCTCAAAATTGGCCTAAAATCAAGGACATATTCTCATACGAATCAACCTCAAGCGTAAGGTTACAAGTCGGAGTTTCACATATGAAAATCGGCGAGGCCGTTAGAGCAACGTTATCGGCCTTCGAATCGGCGATTACGAAGGAGTCCTCAAAGACGCCGGTCCCCAGCGGCAGGATCCACCCGCTCACTCGCTACGCCATGAACTACATCTCATTCCTAGCCGATTACAGCGACGCGCTCACCAACATACTCATCGATTCGCCAAAGACTCCCATGCCGGAGTCCTACTTCCGGACACCGAAGTTCGCGGCGAAAACTCCAGCGCCTCCGGAGCTGGCGGAGCGGCTGGCGTGGGAGATTCTTCTGCTGCTCTGCAAGATCGACGGAAAAGCAGAGCTCTACAAGAACGTGGCGCTGGGTTACCTGTTTCTTGCGAACAACATGCAATACGTGGTCACAAAGGCGCGGAACTCGAAACTAGGTTCCATCCTGGGCGACGATTGGCTCGCGAGTCACGATCAAAAGGTGAAGGAATACGCATCCAAGTACGTGAACATGGCGTGGAGCATGGTGGAGATGTCTCTGCCGGAGAATCCAAAAGCGGCGATGCAACCGGCGGAAGCTTCCGCCAAGTTCCATATCTTCAATATGGCGTTCCAGGAAGCGTGCCAGATGCAGTCCACGTGGATCGCACCTGACCTGAAACTGCGGGATGATATCCAGAAATCGGTAGTTTCGAAGGTGGTGCCTAAGTACCGGGATTTCTACGAGACGAATTGGGTCGGGTCGGATTCGGTTATAGCGTTCTCACCCGATGATTTGCAGAATCATATTTCTTTTATTTTGCATGATGTTGAAGATCCGGGCAGCATTACTACCCATTTTTCTTCTTTTCTTCGATAG 1686 0.5042 MVLRKGLLIVNHQEGSNWETSLSMENARTIIAKWDPLPNGSENKDSTPFFTNTRQEAKRYLNAVSNLHSAMQHLLTLDSSSDRLVEACSLMQVAMNRLERELYRVSAEIRDHVDDDNIRHAAAKEDLKAIVECMFFAGYGKECVQIYTKVRKSNVTEALQNLGVEKPRLSKMKKMQWEMFDFKIKTWLNAVKFAVGALFPGERSLINQIFPSSENTTVVESCFAEICKDGAEMLFLFPEIIAKCEKTPEKMFRLLDLYEALSQNWPKIKDIFSYESTSSVRLQVGVSHMKIGEAVRATLSAFESAITKESSKTPVPSGRIHPLTRYAMNYISFLADYSDALTNILIDSPKTPMPESYFRTPKFAAKTPAPPELAERLAWEILLLLCKIDGKAELYKNVALGYLFLANNMQYVVTKARNSKLGSILGDDWLASHDQKVKEYASKYVNMAWSMVEMSLPENPKAAMQPAEASAKFHIFNMAFQEACQMQSTWIAPDLKLRDDIQKSVVSKVVPKYRDFYETNWVGSDSVIAFSPDDLQNHISFILHDVEDPGSITTHFSSFLR 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01274 561 Gene3D Exocyst complex component Exo70 42 546 - -
Adu08g01274 561 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 23 118 - -
Adu08g01274 561 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 122 549 - -
Adu08g01274 561 Coils Coil 95 115 - -
Adu08g01274 561 Pfam Exo70 exocyst complex subunit 186 540 IPR046364 GO:0000145|GO:0005546|GO:0006887
Adu08g01274 561 SUPERFAMILY Cullin repeat-like 46 540 IPR016159 -
Adu08g01274 561 PANTHER EXOCYST COMPLEX PROTEIN EXO70 122 549 IPR004140 GO:0000145|GO:0006887
Adu08g01274 561 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 118 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01274 Adu-Chr8 21729529 21731214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01274 24 540 EXO70 exocyst subunit family AT5G59730 43.007 7.17e-145 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01274 K07195 - adu:107461556 1115.52