Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01266 ATGGAAGGGAAGGATAGGGAAGTACTTTGTTTATTTATAGGCTGCTGTACTCTTTTCCTTGTAGTAAATTTCTCCGACATTCTCTTGTGTGTCTTCTTGAAAGCATACCGTTTTCTCATTAGGTGTCCTTCCTCCTCGGAAGTTAACCCTTCAAGCTCCCCTAATGATCTGCAGCATCATCAAGTTGTCATTGAGTCCTTCCCTGATATCTCTTCTCTACAAAGCGACGGCTTAGACAGCTCCGTCATAAGTTCTCTTCCGGTGTCGGAGTTCGAAAATGTGGGAGACCACAAGTCTATTAACGCAGATTGTGTCATTTGTCTGGGGGAATTTGAAAAAGGGGAGAAGCTTAAGCTGCTTCCTCAATGTGCTCATGCTTTCCATGTTTCTTGCATAGATGCATGGTTTCAGTCTCATTCCAATTGCCCACTTTGCAGGACCCAAGTCCATCATGTTGAAGATGCTATCGCCGGGTATTCAGTGTCTTCGTATCCATTGCTGGAAACTCTGAGGAGGGAAGACTTTTCCCGAGACAGCGATGAACTAATCCGATCCGTTCGGTCCGAGGTCATACAAGGCTGGGCAAGTAGACCACACACTCTCTAA 606 0.4554 MEGKDREVLCLFIGCCTLFLVVNFSDILLCVFLKAYRFLIRCPSSSEVNPSSSPNDLQHHQVVIESFPDISSLQSDGLDSSVISSLPVSEFENVGDHKSINADCVICLGEFEKGEKLKLLPQCAHAFHVSCIDAWFQSHSNCPLCRTQVHHVEDAIAGYSVSSYPLLETLRREDFSRDSDELIRSVRSEVIQGWASRPHTL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01266 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 152 IPR013083 -
Adu08g01266 201 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Adu08g01266 201 PANTHER RING-H2 FINGER PROTEIN ATL2 19 153 - -
Adu08g01266 201 Pfam Ring finger domain 103 146 IPR001841 -
Adu08g01266 201 SUPERFAMILY RING/U-box 103 152 - -
Adu08g01266 201 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 19 153 IPR044675 -
Adu08g01266 201 SMART ring_2 104 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01266 Adu-Chr8 21677628 21678233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01266 51 157 C3H Transcription Factor Family AT5G17600 44.860 2.79e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01266 - - adu:107461568 399.053