Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01263 ATGGGACTTTATAGCAAAGGTTTCAGGTTTGAAGGTGGCGGGAGACACTTGATAGGTCTCAATCGAACTGGTAAGAGCTGCCGCCTCCGCTGGGTTAACTACCTCCACCCCGGCCTCAAACGTGGCAAGCTCACTCCCTTTGAAGAGAAGCTTGTCTTGGACCTCCACTCCAAGTGGGGCAATAGATGGTCAAGAATTGCTCGCAAGCTGCCCGGGCGCACGGACAACGAGATCAAGAATTACTTTAGAACTCACATGAGGAAGAAGGCTCAAGAGGAGAAGCGCGCGCTTGCATCACCAAGTTCTTCAAGCTGCCATTCCTCACTCTCTTCAAACAACAACAACAACCAAGCTGTTGATTCGCATGCTTCCAAGAAAGCTGGAGAAGAGAGCTTCTATGACACAGGGGGGCCGGTCATGACTGTGGACTGCTCAACCGATTTGAAGGAAGAAGAAGGGTTCTCCATGGATGATATATGGAAAGATATTGAGCTTTGTGAAGAGAAGAACATTGTTGTTTATGATGGGAATAAGAGTGAAGAGGGTTGCAACTTCTCAAGTCCACCATCATGGGAGTATTCTTCTGACCCACTTTGGGTGATGGATGAACAAAGTGTGTTATTCCCAACTAGTGACCCATATTTTTCCTCATTTCTAACTGGCTAA 666 0.4745 MGLYSKGFRFEGGGRHLIGLNRTGKSCRLRWVNYLHPGLKRGKLTPFEEKLVLDLHSKWGNRWSRIARKLPGRTDNEIKNYFRTHMRKKAQEEKRALASPSSSSCHSSLSSNNNNNQAVDSHASKKAGEESFYDTGGPVMTVDCSTDLKEEEGFSMDDIWKDIELCEEKNIVVYDGNKSEEGCNFSSPPSWEYSSDPLWVMDEQSVLFPTSDPYFSSFLTG 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01263 221 Gene3D - 11 40 - -
Adu08g01263 221 SUPERFAMILY Homeodomain-like 21 91 IPR009057 -
Adu08g01263 221 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 211 IPR044676 GO:0003700|GO:0006355|GO:0043565
Adu08g01263 221 CDD SANT 48 86 IPR001005 -
Adu08g01263 221 Pfam Myb-like DNA-binding domain 41 85 IPR001005 -
Adu08g01263 221 SMART sant 40 88 IPR001005 -
Adu08g01263 221 MobiDBLite consensus disorder prediction 96 122 - -
Adu08g01263 221 MobiDBLite consensus disorder prediction 89 134 - -
Adu08g01263 221 Gene3D - 44 129 - -
Adu08g01263 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 90 IPR017930 -
Adu08g01263 221 PANTHER TRANSCRIPTION FACTOR MYB48-LIKE ISOFORM X1 1 211 - -
Adu08g01263 221 ProSiteProfiles Myb-like domain profile. 36 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01263 Adu-Chr8 21660511 21662293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01263 1 202 MYB Transcription Factor Family AT3G46130 58.095 9.54e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g01263 Myb_DNA-binding 9.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01263 K09422 - twl:120001543 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00240 03 2274294 2275308 Adu08g01263 08 21660511 21662293 PCT