Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01250 ATGGAGGAGAGTGTTGCGGCAGGATCGTCATCATCGTCGTCAAGTTGTTCACGATGGAACCCAACGAAAGAGCAGATAAGCACGTTGGAGGAGATCTATAACCAGGGAGTGAGAACTCCAAACCCTAAAGAAATTAAGGAGATTATGGAGAGGCTCAAGGTTTATGGTCCCATTGAAGGTAAGAACGTCTTCTACTGGTTCCAGAATCACAAAGCCAGGCAGAGACAGAGGCAAAAAGATCATCATCAACAACAACTACGTCTTCAACAACACCATCATCATCATCCTTATTTCAATCGCTTTCTCAATTCCATCTCTCCCCCGATTTCTCCTACCGTGGTACGTAGCCCGGCATATGGGTTGGTACAGAGTGAAATTGGGCACTTTCAAAATCAACACTCAAATATGGTGGTAAGCCCAAGGACTGATCAAGCATTGCCTGTGATGATGATGCCACCTCAGCCCATTAGCCCAAGGATTGAGGATGTTGTGCCAATGATGATCCCACCTGAGCCCATCCACCCAAGAACATTGGATCTGTTTCCGCAGCACCCAACTGGCACTTTGGCAGCAGGCAGGGCAAGACAGCAATCTAATCATGAACTTGCAAATCACAACTTCATTGACTTTTTCACTTCTCCAGGCCGGGACCAACCTTGA 660 0.4697 MEESVAAGSSSSSSSCSRWNPTKEQISTLEEIYNQGVRTPNPKEIKEIMERLKVYGPIEGKNVFYWFQNHKARQRQRQKDHHQQQLRLQQHHHHHPYFNRFLNSISPPISPTVVRSPAYGLVQSEIGHFQNQHSNMVVSPRTDQALPVMMMPPQPISPRIEDVVPMMIPPEPIHPRTLDLFPQHPTGTLAAGRARQQSNHELANHNFIDFFTSPGRDQP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01250 219 CDD homeodomain 18 78 IPR001356 GO:0003677
Adu08g01250 219 Pfam Homeodomain 16 76 IPR001356 GO:0003677
Adu08g01250 219 SMART HOX_1 14 81 IPR001356 GO:0003677
Adu08g01250 219 Gene3D - 16 85 - -
Adu08g01250 219 MobiDBLite consensus disorder prediction 1 22 - -
Adu08g01250 219 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 195 IPR044555 GO:0003700|GO:0099402
Adu08g01250 219 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 5 195 - -
Adu08g01250 219 SUPERFAMILY Homeodomain-like 12 82 IPR009057 -
Adu08g01250 219 ProSiteProfiles 'Homeobox' domain profile. 12 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01250 Adu-Chr8 21553700 21554510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01250 1 178 Wox Gene Family AT5G59340 40.212 2.86e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Adu08g01250 Homeodomain 8.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01250 - - aip:107612346 377.096