Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01230 ATGGCTGATCCAAGCCATGGTGGAAATCCGGCCACCGATTTCACAACTAGTAGGGAGGAAAATCCAGCTCCCTTTGATGAGAGTGATTTCTCTGCTGCAGCCCTAAAGTACATAGATGAAATGCTGATGGAAGAAGACATCGATGAAGAGTACAACATGTTCCAACATTCCTCGGCTCTCCTAGCAGCTGAGAAATCACTTTATGATGCCATTGGCCAGAGGTATCCTTCTTCTGCCTCTACTTTGTGGTCTTCAACTTCTTCTATCCAGCATCATAATTACTACCCCAATGTGGAGAGCCCTGGGGATAGTTATAGCAGTACTAGTTCTGGCAGCACTTGTGGCACCACCAATACTAGCAGCTCTGCTGACTACTTCTGGAGCGGTTTTGATCTTTCTATGATTCCATTGATGCCAAACACTTTACCTTTTCCTGATACCTTTAATTTTCAGTCCAATCCATCCTCCACCACCCCCCAATCTAACCACAGAAGCGACTTCACTGCCACAAACAATAGTAGTGGATTAGGACAGGTGGTGATTAAGACTGAAGAAGTCGATTATGATTTCGAGGAAGAGGAAGAGGAAGAGGAAGAGGTCCAATTTCTTGCTGAGTCCATAGGAAGCAGTAGCAAGCAATCAGCATTGTACATGGATGACACTGAGCTATCCGAATTTTTTGATAAGGTACTTATTGGAGCTGGATTGGGAAGAGGGTCATCCCAAGCTGATGAAGGCATTCCCAAAGATTCTCGCGGTAAGAAGAGCCGTGCAAGGAAAAGAAATGACAAAAATGACGACGAAGTTATTGATCTGAGGTCATTGTTGATGCAATGTGCACAAGCAGTTTCTTCTGATAACCGTCCAATGGCAAAAGAGTTATTGATGCAGATTAAGCTGCATTCTTCTCCAACAGGTGATGCAACTCAGAGATTGTCCCATTGCTTTGTAAATGCTCTCGAAGCACGCATGGCAGGGACAGGTACACACATTCATAGTGCCTTATCCACAAAAAGGCCCTCTGCTTCTGATATGGTCAAGGCCTACAAAATGTTTACATTAGCTTGTCCATTTGACAAGTTTGGAATCAGGTTCTCAGTCAACTCAATTGGCGATTTGGCCATGGAAGGTGTCCAAACTCTTCACATTGTCGAATTTGGCATCCGCTATGGCTTCAAGTGGCCTGGACTTATGTATCGCCTATCCAGACTCCCCAGTGGGCCTCCGAAGCTTCGCATAACCGGGATAGAGTATCCACTGCCTGGTTTGAAGCTTGAGCAAACAGGGCAATGCTTAGCAAGGTATTGCGAGCGATTCAACATCCCTTTCGAGTTCAATGCTATTGTTGCAAAGAAATGGGAGAGAATCAAAGTTGAGGATCTCAAGATAAGGGAGAATGAGTTTGTAGCTGTGAATTGCATGTTTAGATTTGAGAATCTGCATGATGAGACAGTTGTGTTGGAGAATCCTAGAGATTCTGTTTTGGAGTTAATAAGGAAAGCTAATCCGAACATATTTGTACATGGCATTATAAATGGTAACTATGATGCTGCATTCTTCGTGACAAGGTTTAAGGAGGCAATGTTTCATTACTCAGCAATGTTTGACATGCTTGATAACACTGTTGCCCGTGATGATCCTATAAGGTTGATGTATGAGGAAGCTATATTTGGGAAGGAAGTGATGAATGTTGTGGCTTGTGAAGGGAATGAGAGGATTGAGAGACCACACAATTACAAGAAATGGCAGGTAAGGAACACAAGAGCAGGGTTCAGGCAGCTTTCATTGGATGAACAAATGATTGAGAAGTTTAAGGATATGTTGAGAAATGAAGGTTATCATAGAGATTTCATGCTTCATGCTGATGGCAAATGGCTTCTACAAGGTTGGAAGGGCAGAATCCTATATGCTTCTTCTTGTTGGGTACCAGCATAG 1935 0.4341 MADPSHGGNPATDFTTSREENPAPFDESDFSAAALKYIDEMLMEEDIDEEYNMFQHSSALLAAEKSLYDAIGQRYPSSASTLWSSTSSIQHHNYYPNVESPGDSYSSTSSGSTCGTTNTSSSADYFWSGFDLSMIPLMPNTLPFPDTFNFQSNPSSTTPQSNHRSDFTATNNSSGLGQVVIKTEEVDYDFEEEEEEEEEVQFLAESIGSSSKQSALYMDDTELSEFFDKVLIGAGLGRGSSQADEGIPKDSRGKKSRARKRNDKNDDEVIDLRSLLMQCAQAVSSDNRPMAKELLMQIKLHSSPTGDATQRLSHCFVNALEARMAGTGTHIHSALSTKRPSASDMVKAYKMFTLACPFDKFGIRFSVNSIGDLAMEGVQTLHIVEFGIRYGFKWPGLMYRLSRLPSGPPKLRITGIEYPLPGLKLEQTGQCLARYCERFNIPFEFNAIVAKKWERIKVEDLKIRENEFVAVNCMFRFENLHDETVVLENPRDSVLELIRKANPNIFVHGIINGNYDAAFFVTRFKEAMFHYSAMFDMLDNTVARDDPIRLMYEEAIFGKEVMNVVACEGNERIERPHNYKKWQVRNTRAGFRQLSLDEQMIEKFKDMLRNEGYHRDFMLHADGKWLLQGWKGRILYASSCWVPA 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01230 644 MobiDBLite consensus disorder prediction 146 173 - -
Adu08g01230 644 Pfam GRAS domain family 272 641 IPR005202 -
Adu08g01230 644 PANTHER SCARECROW-LIKE PROTEIN 14 20 85 - -
Adu08g01230 644 PANTHER SCARECROW-LIKE PROTEIN 14 178 643 - -
Adu08g01230 644 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 178 643 IPR005202 -
Adu08g01230 644 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 85 IPR005202 -
Adu08g01230 644 MobiDBLite consensus disorder prediction 1 27 - -
Adu08g01230 644 MobiDBLite consensus disorder prediction 238 264 - -
Adu08g01230 644 ProSiteProfiles GRAS family profile. 263 642 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01230 Adu-Chr8 21381640 21383592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01230 27 643 GRAS Transcription Factor Family AT2G29060 43.956 4.49e-173 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu08g01230 GRAS 2.4e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01230 - - aip:107614541 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01230 08 21381640 21383592 Adu08g01230 08 21381640 21383592 ECH
Adu03g00288 03 2641593 2644919 Adu08g01230 08 21381640 21383592 PCT