Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01229 ATGCAATTGCTACTCAAACATTACTCAACATTGTTTGTGACCTTTCATCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTTTGGACTTTTATCAAATACTTACCTTGCAACCTGCAACCTGTAGCTGGCAACGAACTCCTCTTCGAATTCATGAGAAACTTTCGGTGTTGCTGAGTGTTTCTGTTTTCTGCCATGGATCCAAACCGCATTTCAATGATTGGGATCTACACGGACAATACAATCACCCTTTCGATTTAACTCCAAGTAATGCTTTTGATCGGTTTGACGCCGACACATTTGGCTTGCATGCACATGCGGTTTCGAATTCCGGAAGCTCGGAGCCGTTTGTTCCACCCTCTTCCGCGAGCCGTGTGGAAAAATCCATGCCGGGTTCAGCTTTTGGGGCTGTGGCTTCTATGCCGGATCCTTCCGTGGAAGACACGGACTTTTCTGAAACGGTGAGGTACATAAGCCAGATTTTGTTGGAAGAGAATTTTGAGGATAAGCCTTGCATGTGCTATAATCCTCTTAGCCTGCAAGATACTGAGAAATCGTTCTATGATGCCCTCAATCAAGAATTTCCCCTTTCCCCTAATGAGCACCCTCTTGATATTCATCAGAATCTGGAGAGTCCTGATGGTGTTAGTGCTGGAAGCTTCCCCACCGGTTCTTCTGGAGGTTGCAGCAATAGCAACAGCAGTAGCACTAGCACTAGCAGTAGTGAGAACCATTTAAGTTCTCATGACTTCAAGACCCTTTCTCCAGATACTCCTGTTTCCGGTGATAGTTCTTTGCAGTTTGATTCACATTCGCATTTGATTTCGCATGTGCCTTCTCAGCTTCACCTTCCTCAACATGCTTTGACTAGTATTGGTGATGGGGTGTTTGATTTGGATCCTTCTGCAACGAAGCTCTTGGCTCAGAATATCTTTAGTAATGCTGACTCTATCTTGCAGTTCAAAAGAGGGTTGGAGGAAGCCAGTAAATTTCTTCCCCCTGGGCCAAGGCTTTCCATTGGCCTGGAGAGCAGTAGCATGCATGCAGAAGAGTCAAAGAGAAGGGTGGAGAAGGCTGCAGTGCCAGTGATGGTGGAGAATGATGCTAAGGAGAGATCAAACAGAGTTGTTGCTGGGCCATATCACATAGTTCCAGCAACAACAAAAGCTGCAAAAAATACAGCAGCGAGGAGTCTGGATGGGGTGAAGAGTAGGAAGCATCATGCTCGCCAGGGCGATGATGGTGAAGAAGAAAGATGCAACAAGCAATCTGCGGTTAGTGTTGAGGAGGAAAGTGAAATATCTGAAATGTTTGACAAGGTGCTGCTTAGTGTTGAAAATGTCCCACTGTCTGCTGAACAGCAGGATGGATTGGTTGTGGATACACAACTAATTGAACAACCACATTCATCCGAGGGAGGGAGGAGTCGATCCAAGAAAAAAGGCAGGAAGAAAGAAACTGTGGATTTGAGAACTCTTTTGGTTCTGTGTGCCCAAGCTGTGTCTGCCAATGACCAAAGGACTGCTAATGAACTACTAAAGCAGATCAGACAGCATTCCTTGCCCTTCGGCGATGCATATCAGAGGCTGGCTCGTTACTTTGCCGATGGCCTGGAGGCACGCATGGCTGGCACTGGCCCTGGAATTCATATATTCTATGCCTCTCTCAGCTACAAGAAGTTCAGTGCTGCTGATTTTCTCAAGGCCTACCAAGTTTTTATATCTGCTTGCCCTTTCAAGAAATTTGCACATTTCTTTTCAAATAAGATGGTTTTGAACATAGCTGAGAAGGCAGAAACCCTTCATATTGTTGATTTCGGTATCCTGTATGGTTTCCAGTGGCCAATACTTATCAAATTTCTAGCCAAGAGAGATGGAGGGCCTCCCAAGCTGCGGATCACAGGAATTGAGTATCCCCAAGCTGGATTTCGTCCCACAGAAAGAATTGAGGAGACTGGACGTCGTCTAGCTAAATATTGCAAGCGTTTCAATGTTCCGTTTGAGTACAAAGCCATAGCATCAAGACACTGGGAGACCATTCAGATTGAAGACCTTAACATCAAGGACAATGAGGTAGTTGCTGTGAACTGTCTGGTAAGGTTCAAGAATTTACTTGAGGAGACGGTTGAAGTGAACAGTCCTAGAAATGCAGTTTTGAATTTAATCAGGAGGATAAACCCAGCTATTTTTGCTCAGACAGTCGTAAATGGTTCTTATAATGCCCCTTTCTTCCTCACACGCTTTCGGGAAGCACTGTTCCATTATTCTGCAATTTACGATATGTTTGATACTCTCATACCCCGAAACAATTCATGGAGGTCGATGCTTGAGAGAGAGTTTTTGGGTCGGGAGATCATGAACGTTGTAGCATGTGAAGGTCTAGAAAGGGTTGAGAGGCCTGAAACATACAAGCAGTGGCAGGCTAGGAATTCAAGAGCTGGTTTTAGGCAGCTACCACTGGATAAGGCGTTAATGGCCAAATTTAGGAGCAAGTTAAAGGAATGGTACCAACACCACAAAGATTTTGTTTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGGATTTTGTATGCCTCCTCTTGTTGGGTGCCAGCATGA 2604 0.4508 MQLLLKHYSTLFVTFHLSLSLSLSLSLDFYQILTLQPATCSWQRTPLRIHEKLSVLLSVSVFCHGSKPHFNDWDLHGQYNHPFDLTPSNAFDRFDADTFGLHAHAVSNSGSSEPFVPPSSASRVEKSMPGSAFGAVASMPDPSVEDTDFSETVRYISQILLEENFEDKPCMCYNPLSLQDTEKSFYDALNQEFPLSPNEHPLDIHQNLESPDGVSAGSFPTGSSGGCSNSNSSSTSTSSSENHLSSHDFKTLSPDTPVSGDSSLQFDSHSHLISHVPSQLHLPQHALTSIGDGVFDLDPSATKLLAQNIFSNADSILQFKRGLEEASKFLPPGPRLSIGLESSSMHAEESKRRVEKAAVPVMVENDAKERSNRVVAGPYHIVPATTKAAKNTAARSLDGVKSRKHHARQGDDGEEERCNKQSAVSVEEESEISEMFDKVLLSVENVPLSAEQQDGLVVDTQLIEQPHSSEGGRSRSKKKGRKKETVDLRTLLVLCAQAVSANDQRTANELLKQIRQHSLPFGDAYQRLARYFADGLEARMAGTGPGIHIFYASLSYKKFSAADFLKAYQVFISACPFKKFAHFFSNKMVLNIAEKAETLHIVDFGILYGFQWPILIKFLAKRDGGPPKLRITGIEYPQAGFRPTERIEETGRRLAKYCKRFNVPFEYKAIASRHWETIQIEDLNIKDNEVVAVNCLVRFKNLLEETVEVNSPRNAVLNLIRRINPAIFAQTVVNGSYNAPFFLTRFREALFHYSAIYDMFDTLIPRNNSWRSMLEREFLGREIMNVVACEGLERVERPETYKQWQARNSRAGFRQLPLDKALMAKFRSKLKEWYQHHKDFVFDEDNNWMLQGWKGRILYASSCWVPA 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01229 867 PANTHER SCARECROW-LIKE PROTEIN 34 115 866 - -
Adu08g01229 867 MobiDBLite consensus disorder prediction 463 483 - -
Adu08g01229 867 MobiDBLite consensus disorder prediction 196 263 - -
Adu08g01229 867 MobiDBLite consensus disorder prediction 388 426 - -
Adu08g01229 867 Pfam GRAS domain family 488 864 IPR005202 -
Adu08g01229 867 ProSiteProfiles GRAS family profile. 479 865 IPR005202 -
Adu08g01229 867 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 115 866 IPR005202 -
Adu08g01229 867 MobiDBLite consensus disorder prediction 397 424 - -
Adu08g01229 867 MobiDBLite consensus disorder prediction 211 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01229 Adu-Chr8 21364050 21366866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01229 152 867 GRAS Transcription Factor Family AT1G07530 48.281 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu08g01229 GRAS 8.8e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01229 - - adu:107461599 1539.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01229 08 21364050 21366866 Adu03g00288 03 2641593 2644919 PCT
Adu03g00289 03 2646285 2649785 Adu08g01229 08 21364050 21366866 PCT