Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01228 ATGAATGGTTTTCATTCATCATCTTCATCTTCTTCCGGAACCATCTCAAGTGGAGATTCCACTGAGTCTATTAAATATTCCAACAACATCCTCAGATACATAAGTGACATCCTCATGGATGAGGAAGATGACTTGGAGAACAAACCCTGTATGTTGCAACAGTGTTTGAGGCTCCAAGCTGCTGAAAAATCATTCTCTGAGGTGCTTGGAAATTCATCAAATTCTCCACCATCTCAAGGCTGTGATGAAAGCAACCAAGATGGTGATTACTGTCGCAGCACAAGCTTCGAAAGCTATAGCAGCTTTAACACTGATAATAGCTCTTATGAGTTTGATTGGGTCAATCTTGTTGGCGAGTATGAATCGTCTTTGCTACAAGCCTCTCTTCTTGGTGGATCTTATGGAACTCACTACCAGAACATGGTTCCATTGATCAACAATGAAGAGGGATCTAGTCCTGGAACAAGGGAAAAGAGAAGCTATCAGGTTGATGATGACGCTTCATATGAACAAGGCCGAAGAGGAAACAAGATCTCAGCTACTGTTTTCTCCAACGAGTCAGAGCCACCAGAGATTCTTGATGAAGTGCTGCGTATCCGGTTTGGAAGAAGTAAAAAGTATTGTTGTGTTGAGCCCTTATCGAAAAATGACATGCTGAAGATGCAGAATGTTGGATCCAATTCGAAGACAGCACGTTCAAAGAACAGAAACAGCAACACAGATGCAACTGTGGATTTATGGACTTTGCTAACTCAATGTGCACAAGCAGTGGCAGACTATGATAAGAGGAATGCATATGATACACTCAAGAAGATTAGGCAGCATTCTTCACCGTCCGGCGATGGACTCCAGCGTATGGCGCATTACTTCGCCATTGGCCTCGAGACACGGTTGAATGCCGGAACACCGTCATATCCTCCCCTTGATATGGCATCTGCTGCAGATATGTTGAAAGCTTACAAACTCTACGTTACAGCTTCGCCTTTGCAGTGGATGACAAATAAATTGGCAACCCAAACAATCAAGAACCTGGTTCAGAATGAAAGCCGCGTTCACATTATTGACTTTGGAATTTGCTATGGTTTCCAGTGGCCCTGCCTTATCAGGTATCTGTCAGAGAGAAACGGGCCTATAAAGCTTCGTATAACCGGAATTGATCTTCCTCAGCCGGGTTTCCGGCCGACGGAAAGGGTCGAGGAGACCGGAAGACGGTTGGAGACTTTGTGTAAGAGGTACAAGGTGCCTTTCGAATACAACTGCATTGCACAGAAATGGGAAACAATCAGGCTTGAGGATCTTAAAATAGACAGGAATGAAGTGACAGTGGTTAACTGCTTTTACAGGCTGAAAAACCTGCCGGATGAAACTGTGTTAGTAAACAGTCCAAGAGATGCAGTGTTGAAGCTGATCAGGAGCATTAATCCAAACATCTTCCTGCATGGGGTAGTCAATGGCTCTTATAGTGCACCGTTTTTCCCGACTCGGTTCAGGGAGGCTCTCTTCCACTTCTCATCGCAGTTTAATATGTTTGAAGCTAATTGCCCCCGCGAAGATGCAGAAAGGATGATACTTGAAAAAGGGACGATTGGAAGGGATGCTATCAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGAGCTACAAGCAATGGCAGATTAGGAACAAGAGAGCAGGCTTCAAGCAAATTCGGGTGGATCAGGAATTGGTGAATGAAATCAAGGGAATGGTGAAGAATGAGTATCATAGAGATTTTGTGGTTGACCAGGATGGCAACTGGGTTTTGCATGGCTGGAAAGGTCGTATTTTTCATGCTCTCTCTGTTTGGGTTCCTGCATAA 1848 0.4437 MNGFHSSSSSSSGTISSGDSTESIKYSNNILRYISDILMDEEDDLENKPCMLQQCLRLQAAEKSFSEVLGNSSNSPPSQGCDESNQDGDYCRSTSFESYSSFNTDNSSYEFDWVNLVGEYESSLLQASLLGGSYGTHYQNMVPLINNEEGSSPGTREKRSYQVDDDASYEQGRRGNKISATVFSNESEPPEILDEVLRIRFGRSKKYCCVEPLSKNDMLKMQNVGSNSKTARSKNRNSNTDATVDLWTLLTQCAQAVADYDKRNAYDTLKKIRQHSSPSGDGLQRMAHYFAIGLETRLNAGTPSYPPLDMASAADMLKAYKLYVTASPLQWMTNKLATQTIKNLVQNESRVHIIDFGICYGFQWPCLIRYLSERNGPIKLRITGIDLPQPGFRPTERVEETGRRLETLCKRYKVPFEYNCIAQKWETIRLEDLKIDRNEVTVVNCFYRLKNLPDETVLVNSPRDAVLKLIRSINPNIFLHGVVNGSYSAPFFPTRFREALFHFSSQFNMFEANCPREDAERMILEKGTIGRDAINVIACEGAERVERPESYKQWQIRNKRAGFKQIRVDQELVNEIKGMVKNEYHRDFVVDQDGNWVLHGWKGRIFHALSVWVPA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01228 615 ProSiteProfiles GRAS family profile. 237 613 IPR005202 -
Adu08g01228 615 MobiDBLite consensus disorder prediction 67 87 - -
Adu08g01228 615 Pfam GRAS domain family 248 612 IPR005202 -
Adu08g01228 615 MobiDBLite consensus disorder prediction 144 175 - -
Adu08g01228 615 MobiDBLite consensus disorder prediction 1 21 - -
Adu08g01228 615 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 614 IPR005202 -
Adu08g01228 615 MobiDBLite consensus disorder prediction 152 172 - -
Adu08g01228 615 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 6 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01228 Adu-Chr8 21352293 21354140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01228 26 614 GRAS Transcription Factor Family AT2G29060 44.318 9.72e-161 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu08g01228 GRAS 4.2e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01228 - - adu:107461562 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01228 08 21352293 21354140 Adu08g01228 08 21352293 21354140 ECH
Adu08g01228 08 21352293 21354140 Adu03g00290 03 2659202 2661736 PCT