Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01227 ATGAATGGTTTTCACTATGAGGGTTCATCATATTCACCTGGAACCAGCTCAAGTGAAGATTCTGCTGAGTATAATAAATATTCCAACCCCATCCTCAGATACATAAGTGACATCCTCATGGAGGAGGAAGATGACTTGGAGAACAAACCCTGTATGTTGCAGCAGTGTTTGAAGCTCCAAGCTGCTGAAAAATCATTCTCTGAAGTGCTTGGAAATTCATCAAATTCTATACCCTCTCAAGGGTGTGATGAAAACAACCGAGATGGTGATTATGGTCGGACCACCAGCTTCGAGAGCTATAGCAGCTGCACCACTGATCATAACTCTTATGAGTCTGATTGGGTGAATCTTGTTGGTGAATATGAATCTTCTTTGCTACAAGCCCCTGATAATGACTCTTATGAGTCAGATTGGCTCAATCTTCTTGACTCCCCAAATGATGGATCTTCAGAAATTCACTACCAGAACATGGTGCTGCAGACAAACAATGAAGAGGGATCTCGATCTGGAACAACAGGAACAAGGGAAAAGAGAAGTATTCAGGTTGATGATGATACTTCTTATGAACAAGGTCGAAGAGGAAGCAAGATCTCAGCTGTTTTCTCTGATGAGTCAGAGCCACCAGAGATTCTTGATGAAGTGCTGCGTGTTCAGATTGGAAGAAGTCAATGTTTATCTGGTGTTGAACCCTTACCAGAGAATGAGATGCCGAAGAGGCAGAATGTTGACTCAGTTGGATCCAGTGGAAAGACGGCAAGATCGAAGAAAGGAAGCAGCAGAAATAGCAACACAGGTGCAACTGTGGATTTATGGAGTCTGCTAACTCAGTGTGCACAAGCAGTGGCAAACTATGATCAGAGGAATGCATATGATACACTCAAGCAGATTAGGCAACATTCTTCACCAGCTGGGGATGGAATGCAGCGTATGACGCATTACTTCGCCATTGGCCTTGAGACACGGTTGAATGCTGGAACACCTTCATATCTTCCCCTTGATATGGCATCTGCTGCTGATATGTTGAAAGCTCACAAACTATATGTGACAGCTTCTCCTTTGCAGAGGATGACAAATACATTTGCAACCCAAACAATCATGAACCTAGTACAGAATGAAAGCTGTGTTCACATTATTGACTTTGGAATTTGCTATGGTTTCCAGTGGCCCTGCCTTATCAAGCGTCTGTCACAGAGAAATGTGCCTATAAAGCTTCGTATAACCGGAATTGATCTTCCTCAGCCGGGATTCCGGCCGGCAGAAAGGCTCGAGGAGACTGGTAGACGCCTGGAGAATTACTGTAAGAGGCACAATGTGCCTTTCGAATACAACTGCATTGCACAGAAATGGGAAACAATCAGGCTTGAGGATCTTAAAATAGACAGGAATGAAGTGACAGTGGTTAACTGCTTTTACAGGCTGAAAAACCTGCCGGATGAAACTGTGTTAGTAAACAGTCCAAGAGATGCAGTGTTGAAGCTGATCAGGAGCATTAATCCAAACGTCTTCCTGCATGGGGTAGTCAATGGCTCTTATAGCGCGCCGTTTTTCCTGACACGCTTCAGGGAGGCGCTCTTCCACTTCTCGTCACAATTTGATATGTTTGAGGCTAATGTCCCCCGCGAAGATGCAGAAAGGATGATACTTGAGAAAGGGTTGATTGGAAGGGATGCTATCAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGACCTACAAGCAATGGCAGATTAGGAACACGAGAGCAGGCTTCAAGCAAATTCGGGTGGATCAGGAATTGGTGAATGAAATCAAGGGAATGGTGAAGAAAGAGTATCATAGAGATTTTGTGGTTGACCAGGATGGCAAGTGGGTTTTGCAGGGCTGGAAAGGCCGTATTCTTCATGCTCTCTCTGCTTGGGTTCCTGCTTAA 1920 0.4458 MNGFHYEGSSYSPGTSSSEDSAEYNKYSNPILRYISDILMEEEDDLENKPCMLQQCLKLQAAEKSFSEVLGNSSNSIPSQGCDENNRDGDYGRTTSFESYSSCTTDHNSYESDWVNLVGEYESSLLQAPDNDSYESDWLNLLDSPNDGSSEIHYQNMVLQTNNEEGSRSGTTGTREKRSIQVDDDTSYEQGRRGSKISAVFSDESEPPEILDEVLRVQIGRSQCLSGVEPLPENEMPKRQNVDSVGSSGKTARSKKGSSRNSNTGATVDLWSLLTQCAQAVANYDQRNAYDTLKQIRQHSSPAGDGMQRMTHYFAIGLETRLNAGTPSYLPLDMASAADMLKAHKLYVTASPLQRMTNTFATQTIMNLVQNESCVHIIDFGICYGFQWPCLIKRLSQRNVPIKLRITGIDLPQPGFRPAERLEETGRRLENYCKRHNVPFEYNCIAQKWETIRLEDLKIDRNEVTVVNCFYRLKNLPDETVLVNSPRDAVLKLIRSINPNVFLHGVVNGSYSAPFFLTRFREALFHFSSQFDMFEANVPREDAERMILEKGLIGRDAINVIACEGAERVERPETYKQWQIRNTRAGFKQIRVDQELVNEIKGMVKKEYHRDFVVDQDGKWVLQGWKGRILHALSAWVPA 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01227 639 MobiDBLite consensus disorder prediction 240 263 - -
Adu08g01227 639 MobiDBLite consensus disorder prediction 177 191 - -
Adu08g01227 639 MobiDBLite consensus disorder prediction 160 176 - -
Adu08g01227 639 ProSiteProfiles GRAS family profile. 261 637 IPR005202 -
Adu08g01227 639 Pfam GRAS domain family 272 636 IPR005202 -
Adu08g01227 639 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 2 638 - -
Adu08g01227 639 MobiDBLite consensus disorder prediction 227 263 - -
Adu08g01227 639 MobiDBLite consensus disorder prediction 1 23 - -
Adu08g01227 639 MobiDBLite consensus disorder prediction 160 194 - -
Adu08g01227 639 MobiDBLite consensus disorder prediction 70 89 - -
Adu08g01227 639 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 638 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01227 Adu-Chr8 21347611 21350098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01227 31 71 GRAS Transcription Factor Family AT1G07530 60.976 9.16e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu08g01227 GRAS 1e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01227 - - aip:107612146 1273.84