Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01212 ATGAGTTTTGTTTTCAGAGGGAGTAGGGAAGATATTGAAAGTGGTTTTCCAGATTATGTTCCTGAAAGATCCTTGATGCGTATTCATCCGGCTCGACCAATTAGTAGCAATTCTCTGGCTTTTCTCACCACAGTTATTGTGTTATTCATGCTGCTGAACTCTCCTCAGATGGCACATTATTTTATGCTATGGCTTGTGCTTGCTGTTTTTGCGATGGCTACAAGCTTGAGGATGTACACAGCTTGTCAGCATCTTCAAGCTCAGGCCAGGGCTCATGCAGCAGCAGCAACTGGATTGCTTAGCCATACCGAATTATGGCTTAATGTGCCACCATCCATAGCAATTGCAACTAGAGGACAATTGCAGGGGCTTAGGCTTCAGCTTGCACTACTTGATCGTGAATTCGATGAACTAGATTATGATGCTTTGAGAGCTCTTGACTCTGATGCTGTTTCGACTACTACTTCCATGACTGAGGAAGAGATAAATGCCTTACCCGTTCACAACTATAAAGTTGCAGTTCCAACAAAGGATTGCTCAGCAGGGTTGGGATCCTCTTCAAGTGCTGCTGAGAATAAGCAAGCCTGCGAAGGAGCCGAGGGAAATAACCAAGGCCCGGAAGATGAGCTAACATGTACCATATGCTTGGACCAAGTTAACGGTGGCGAACTAGTCCGTAGCCTGCCATGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCCGGCAGCGAGGAACATGTCCGGTGTGCAAATTTAAGATGGGTTTGGAATGGCGAGGAAACAGGGAGACTGAGACTGATTCCGACGGTTCAGATATTGCTTAG 831 0.4621 MSFVFRGSREDIESGFPDYVPERSLMRIHPARPISSNSLAFLTTVIVLFMLLNSPQMAHYFMLWLVLAVFAMATSLRMYTACQHLQAQARAHAAAATGLLSHTELWLNVPPSIAIATRGQLQGLRLQLALLDREFDELDYDALRALDSDAVSTTTSMTEEEINALPVHNYKVAVPTKDCSAGLGSSSSAAENKQACEGAEGNNQGPEDELTCTICLDQVNGGELVRSLPCLHQFHANCIDPWLRQRGTCPVCKFKMGLEWRGNRETETDSDGSDIA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01212 276 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Adu08g01212 276 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 274 - -
Adu08g01212 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 258 IPR013083 -
Adu08g01212 276 SMART ring_2 212 252 IPR001841 -
Adu08g01212 276 CDD RING-H2_PA-TM-RING 211 253 - -
Adu08g01212 276 SUPERFAMILY RING/U-box 207 258 - -
Adu08g01212 276 Pfam Ring finger domain 211 253 IPR001841 -
Adu08g01212 276 PANTHER TARGET OF ERK KINASE MPK-1 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01212 Adu-Chr8 21232891 21236047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01212 1 276 C3H Transcription Factor Family AT3G55530 66.547 3.74e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01212 K16283 - gmx:100805406 389.423