Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01208 ATGGGAGAAGAGGTTAAGATCGCCGACTACCCAGGCGGCGGCGCCGACGACGAGCGTGTTTCCGAGTGGGAGCTTGGCCTCCCCTCTCCCGCCGACCTTCCGCCGCTCTCTCAGGCCCTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCACCCCGGAGCCCTACCGGACTCTTCTCGACGTCAACCGCGCCTCGCAGGACACCATCTCCGCAATTCGCGGCGGCGCCTCCCAGGCCTTCTCCTCCAGCAATTTCCAACTCGATGACCGCGCCACCGTGTTTGAGCCCGACGCCACGGCGTTTGCCGATGAGGAATTAGAGCCCGATCGAGATGGCTCTGGCTCTGATTCCAGGAAGCTCCGGAAGATCGACAGCGCCGCCGAGGAGGCTGATTCGGCAGCGCCACCGGCCAACGACGATCCCTCCGCCCGGTCAATGAAGCGGCCGCGCCTCGTGTGGACGCCTCAGCTTCACAAGCGCTTCGTCGACGTGGTGGCCCACCTCGGAATCAAGAACGCGGTTCCGAAGACGATTATGCAGCTAATGAACGTAGAAGGATTGACTCGCGAGAACGTTGCGAGCCACCTTCAGAAATATCGCCTTTACTTGAAGCGAATGCAAGGGTTGTCCAACGAAGGTCCTTCTTCTTCTGACCAGTTGTTCGCGTCGACTCCTGTGCCGCAGAGCTTGCACGAGTCCGGCGGTGGTGGCGGAAGCGCGGGGCATTCCCATGGAAACGGACACCTTCCGGTTCCAATTCCGTTGCCGTATCCAGGTCCGCCGGCGATGATGCCAATGCCGATGCTCGGGATGCCTCCGATGGGTATGGCCGTAGGGAACCACCACGGATTCAACCCGTTGGCGCAGCAACGGGATTGGTCCGGTGCGAATAAATTTGGTTCCGTTGTTTCGTACCCTCAGAGTCACAGTCAGGGCGTCACTCCTAGTGATAAATGA 960 0.6104 MGEEVKIADYPGGGADDERVSEWELGLPSPADLPPLSQALIPPELASAFSITPEPYRTLLDVNRASQDTISAIRGGASQAFSSSNFQLDDRATVFEPDATAFADEELEPDRDGSGSDSRKLRKIDSAAEEADSAAPPANDDPSARSMKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHESGGGGGSAGHSHGNGHLPVPIPLPYPGPPAMMPMPMLGMPPMGMAVGNHHGFNPLAQQRDWSGANKFGSVVSYPQSHSQGVTPSDK 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01208 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 205 IPR017930 -
Adu08g01208 319 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 150 202 IPR006447 GO:0003677
Adu08g01208 319 Pfam Myb-like DNA-binding domain 153 201 IPR001005 -
Adu08g01208 319 SUPERFAMILY Homeodomain-like 147 206 IPR009057 -
Adu08g01208 319 MobiDBLite consensus disorder prediction 100 146 - -
Adu08g01208 319 MobiDBLite consensus disorder prediction 299 319 - -
Adu08g01208 319 MobiDBLite consensus disorder prediction 104 129 - -
Adu08g01208 319 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 311 - -
Adu08g01208 319 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 311 IPR044841 GO:0003700|GO:0006355
Adu08g01208 319 MobiDBLite consensus disorder prediction 210 231 - -
Adu08g01208 319 Gene3D - 146 208 - -
Adu08g01208 319 MobiDBLite consensus disorder prediction 210 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01208 Adu-Chr8 21133047 21135124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01208 1 302 G2-like Transcription Factor Family AT3G46640 54.799 3.59e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu08g01208 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01208 - - zju:107411020 356.681