Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01207 ATGATAGATTTTTTGGATAAGCTGATTAACATGCATGGATGTGGATTGACTAGGTCTCTTCCTCTTCCTCCTCCTTTGACTGCACCCAACAACTTCCTTTCTCAAATTAGCACACAACTATGCTTGAGATCCCTTCTTTCCATCCAGACCCAAAACCCGTCACTTTCTTTCATACCCACTTCTAAATATAGATATACAGGTGCTTTCAGCTACGGGAATCATGGGATTCGTAACAATGGAGGAAGACGTGGCAACAGACCAGTGGCTATGAGAGCAAGCCGCGGAGAATCTCCGTACGAGATTCTGGGAGTGTCCCCATCCGCAACTTCCGACGAAATCAAAAGGGCCTATAGGAAACTTGCCCTCAAGTATCACCCTGATGTTAACAAAGAGGATAAGGCGCAGGAGAAGTTTATGAGGATAAAGCATGCATACAATACCCTGATAAATTCTAATTCCCGCAGAAAATATGATTTTGGAAATCGTGGTTCTGATTTTTCATATTCCTCTTCTCAAAGAAGCCAAAGTAGGAGCACACAAGAAGAAGAATTTTATGGATTAGGTAATTTTTTCAGGGATGTTCAAATAACAATAGAGGACTTTTTTAAAGATCTTCAAGAAGAATTCAAGAACTGGGAAGCTAATGCTGCTTCAGAGGGAAAGCCAAAGAGCCTATGGGAGGAAATAGCGGAAATAGGAGAAGAATTTGTGGAGTTTCTTGAGAAAGAACTCAATATTGTTGATACAGAAGCTGATCAAAATAACAATGAAACAACAACTCAGGGTGGAAATAAATCTAACATGTCTGGGACAGGCACACCGGATAATGAAGCTGGCAAAGGAAAAACAAGCATTGAAGATAACCTTGATGATGTAGAAGCCACTCTGGCCAAGTTAAAGAAGGAACTAGGCTTATAG 918 0.4085 MIDFLDKLINMHGCGLTRSLPLPPPLTAPNNFLSQISTQLCLRSLLSIQTQNPSLSFIPTSKYRYTGAFSYGNHGIRNNGGRRGNRPVAMRASRGESPYEILGVSPSATSDEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSNSRRKYDFGNRGSDFSYSSSQRSQSRSTQEEEFYGLGNFFRDVQITIEDFFKDLQEEFKNWEANAASEGKPKSLWEEIAEIGEEFVEFLEKELNIVDTEADQNNNETTTQGGNKSNMSGTGTPDNEAGKGKTSIEDNLDDVEATLAKLKKELGL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01207 305 PRINTS DnaJ domain signature 99 117 IPR001623 -
Adu08g01207 305 PRINTS DnaJ domain signature 117 132 IPR001623 -
Adu08g01207 305 PRINTS DnaJ domain signature 133 153 IPR001623 -
Adu08g01207 305 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 86 303 - -
Adu08g01207 305 CDD DnaJ 98 150 IPR001623 -
Adu08g01207 305 Gene3D DnaJ domain 95 217 IPR036869 -
Adu08g01207 305 SMART dnaj_3 96 153 IPR001623 -
Adu08g01207 305 Pfam DnaJ domain 98 158 IPR001623 -
Adu08g01207 305 ProSiteProfiles dnaJ domain profile. 97 161 IPR001623 -
Adu08g01207 305 MobiDBLite consensus disorder prediction 248 287 - -
Adu08g01207 305 SUPERFAMILY Chaperone J-domain 62 157 IPR036869 -
Adu08g01207 305 Coils Coil 282 305 - -
Adu08g01207 305 Coils Coil 237 257 - -
Adu08g01207 305 MobiDBLite consensus disorder prediction 249 278 - -
Adu08g01207 305 ProSitePatterns Nt-dnaJ domain signature. 138 157 IPR018253 -
Adu08g01207 305 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 86 303 - -
Adu08g01207 305 MobiDBLite consensus disorder prediction 161 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01207 Adu-Chr8 21127577 21129896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01207 99 158 C2H2 Transcription Factor Family AT1G74250 39.394 1.80e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01207 - - adu:107461539 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01207 08 21127577 21129896 Adu08g01207 08 21127577 21129896 ECH