Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01193 ATGGGAAGTTGTTGCAGCAAACTCTGCATATGCTGGTGGCCCTGCTGCTGCAACAAAAGATCAAATCTTCAAGACTTACCCGAAAATGAAGATGGGAACAAGGGTGAGAAGAAGGGTCCTGCTAGCTCTAGCTTCACTGAGTTCAGCTTCGACCAACTGCAAACTGCCACGTCAGCATTCTCTCCCGACAACATTGTTTCTGAACACGGTGAGAAGGCTCCCAACGTTGTCTACAAAGGGAGGCTTGAAGATGATAAGCTTGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAGTTCCTAGAGGAAGCACGGGCAGTGGGGCAGCTGAGGAGTGAGCGTTTGGCTAATTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGGTTGCTTGTGGCAGAGTTTATGCCCCATGAAACTCTCTCCAAGCACCTCTTTCACTGGGAGTCCCAGCCCATGAAATGGGCAATGAGGCTGAGAGTTGCCTTGTATTTGGCACAAGCATTGGAATATTGCAGCAGTCAGGGAAGGGCATTATACCATGATCTTAATGCTTATAGAATTTTGTTCGATCAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTAATGAAAAACAGCAGAGATGGCAAAAGTTATAGTACAAATTTAGCCTTCACCCCTCCAGAGTATTTAAGGACAGGAAGAATCATCCCAGAAAGTGTGATTTACAGTTTTGGTACCCTTTTGCTTGATCTTCTTAGTGGCAAGCATATTCCACCAAGTCATGCACTTGACCTCATCCGAGGGAAAAATTTTTCATTTCTGATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAAATAGTGAGACTAGCGTCGCGTTGCTTACAGTATGAACCTCGAGAAAGACCAAATGCCAAGTCGCTTGTGACTGCTTTAACTCCTCTTCAGAAAGAAGCTTCAGTACCTTCGCAAGTTTTGATGGGCATACTGGAGGAGGGTGCATCATCAAAAGAAACAGTTTCATTGACACCTTTTGATCAAATACAAGAAACCCTAAATGCTAAGAAGCATGGAGATTCTGCTTTTCGTGCCAAAGATTACCCTACAGCCATTGACTACTATACAAAGTTCATTGATGGTGGGACCATGGTATCGCCGACTGCTTATGCAAGGCGCTGCTTGTGTTACTTGATGAACAACATGCCACAAGAAGCTCTTGGAGACGCCATGCAAGCTCAATCAATATCGCCGACCTGGCCAACTGCGTTCTATCTTCAAGCAGTGGCACTCTTCAGCCTTGGCATGGACAATGATGCGCAGGAAAGTCTTAAAGACGGCACAATGTTAGAATCCAGAAACCAGAGAAATTGA 1377 0.4539 MGSCCSKLCICWWPCCCNKRSNLQDLPENEDGNKGEKKGPASSSFTEFSFDQLQTATSAFSPDNIVSEHGEKAPNVVYKGRLEDDKLVAVKRFNKSAWPDSRQFLEEARAVGQLRSERLANLVGCCCEGEERLLVAEFMPHETLSKHLFHWESQPMKWAMRLRVALYLAQALEYCSSQGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRIIPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFSFLMDSCLEGHFSNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKEASVPSQVLMGILEEGASSKETVSLTPFDQIQETLNAKKHGDSAFRAKDYPTAIDYYTKFIDGGTMVSPTAYARRCLCYLMNNMPQEALGDAMQAQSISPTWPTAFYLQAVALFSLGMDNDAQESLKDGTMLESRNQRN 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01193 458 ProSiteProfiles Protein kinase domain profile. 63 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01193 458 Gene3D Transferase(Phosphotransferase) domain 1 140 331 - -
Adu08g01193 458 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Adu08g01193 458 Pfam Protein tyrosine and serine/threonine kinase 76 314 IPR001245 GO:0004672|GO:0006468
Adu08g01193 458 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 348 IPR045845 GO:0004672|GO:0009742
Adu08g01193 458 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 348 457 IPR045845 GO:0004672|GO:0009742
Adu08g01193 458 SUPERFAMILY Protein kinase-like (PK-like) 40 319 IPR011009 -
Adu08g01193 458 Gene3D Tetratricopeptide repeat domain 347 458 IPR011990 GO:0005515
Adu08g01193 458 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 348 - -
Adu08g01193 458 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 348 457 - -
Adu08g01193 458 SUPERFAMILY TPR-like 357 452 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01193 Adu-Chr8 21014575 21018043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01193 22 314 Glycoside Hydrolase AT3G07070 32.399 1.84e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Adu08g01193 PK_Tyr_Ser-Thr 2.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01193 - - gmx:732542 755.362