Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01188 ATGATGAGCAAAGACAAGGAGGAGGAGAAGAAGAACAAGAGTAAGAATAAGCTAAGGAAGGGATTATGGTCACCAGAAGAAGATGAGAAGCTGATGAGGTACATGATGAACAATGGACAAGGTTGTTGGGGTGAAGTGGCTAGGAATGCTGGCTTGCAAAGGTGTGGCAAGAGTTGTCGCCTTCGATGGATTAATTACTTGAGACCTGATCTTAAGAGAGGTGCCTTCTCACCACAAGAACAGCAACTTATCATCCATTTACATTCCCTTCTTGGCAACAGATGGTCTCAAATAGCGGCACAGTTGCCGGGTCGAACAGACAATGAAATCAAGAATTTTTGGAATTCAACAATAAAGAAAAGGTGTATAACCATCACCTCATCATCAACCTCCCAAAACACGAGTGAGTCCTACTCATCATGGCTTGAACCACATGATCATCATAACAACATGGAAGGATTTACAATGATGCCTATGTTCAGTTGCTCATCATCTCAATCACCGTCAATCATTATCGATGAGCATTTGCCTATGCCGATGGAGAATAATAACATGCATGCAGCTATGGGAATTGACAAAGGATATTTCAACAACAACAACAACAATAATAATAATAATAATATGTTTGTTCCTCCTTTACTAGAGAGTGCTACTACGAGCAACGTTTATTTTGATGAGGACGTAAACACTCTCCATAATAAGGTTGTTAGCGTGGAGGAGGATTCATTAATAAGCATGGAAGATTGGGAGTTGGAGGACTTGATGATCAAAAGTGTTTCCTCCCCGTTTCTTGATTTTCCGCTATCATGA 810 0.4062 MMSKDKEEEKKNKSKNKLRKGLWSPEEDEKLMRYMMNNGQGCWGEVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEQQLIIHLHSLLGNRWSQIAAQLPGRTDNEIKNFWNSTIKKRCITITSSSTSQNTSESYSSWLEPHDHHNNMEGFTMMPMFSCSSSQSPSIIIDEHLPMPMENNNMHAAMGIDKGYFNNNNNNNNNNNMFVPPLLESATTSNVYFDEDVNTLHNKVVSVEEDSLISMEDWELEDLMIKSVSSPFLDFPLS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01188 269 Gene3D - 74 143 - -
Adu08g01188 269 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Adu08g01188 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
Adu08g01188 269 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Adu08g01188 269 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Adu08g01188 269 CDD SANT 75 115 IPR001005 -
Adu08g01188 269 PANTHER MYB DOMAIN PROTEIN 55 12 184 - -
Adu08g01188 269 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Adu08g01188 269 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Adu08g01188 269 Gene3D - 17 73 - -
Adu08g01188 269 SMART sant 19 69 IPR001005 -
Adu08g01188 269 SMART sant 72 120 IPR001005 -
Adu08g01188 269 CDD SANT 23 67 IPR001005 -
Adu08g01188 269 MobiDBLite consensus disorder prediction 1 22 - -
Adu08g01188 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Adu08g01188 269 PANTHER TRANSCRIPTION FACTOR MYB46 12 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01188 Adu-Chr8 20891311 20892921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01188 12 153 MYB Transcription Factor Family AT3G08500 69.444 9.28e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu08g01188 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01188 K09422 - gmx:100785810 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01188 08 20891311 20892921 Adu03g00331 03 2959185 2961668 PCT