Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01179 ATGAACGGAAATCTTGGTCCCCTCTTCGCCTTCGTTTCTCTGACTCGGTTTGGTTTGCAACACTGTGCCACTGAGCGTGGTCACAGGTCATTGCAAGATTTCAGCTTGTGTTCTTGCCTTGTACTTTTTTTAGGTGGTCCTGGTGGGGGTATCTTGGACCTCGAAGTGCCATTTCATAGACACCAACAACAATCCCAGATGGGTCATCCGTCGGTGACGGGACAGCATCACTTGAATATGAGGACTGATCTGGAAAATGATCACCCAATTGGCCTCATGGAACTCAAAGGGTCGAATGCGGGGGTGAATTTTGGTAAAGGAAAGGGAATTGCTTCTTCTAATCCTGCCAATAGTAATGATTTGAGCGATGATGACGATGCGGAAGATGGGAATTGCGAGAATTTTGATGGTGGGAAGAGCAAAAAGGGGTCTCCTTGGCAGCGAATGAAGTGGACAGACAATGTGGTTCAGCTTCTTATAGCTGTGGTGAGCTGTGTTGGGGACGATGGCACCATTAATGGCACGGATGGTCATAAAAGGAAATCCGGTGTCTTGCAAAAGAAGGGCAAGTGGAAAACCGTCTCCAAGATAATGATAAGCAAGGGTTGTCATGTGTCCCCGCAGCAGTGCGAGGACAAGTTTAACGACTTAAATAAGAGGTATAAGAGGTTAAATGATATACTTGGAAGGGGAACTTGTTGCCAAGTGGTTGAGAATCCTACACTGATGGATTCGATGCCAAACCTCTCGGCTAAGGCAAAGGATGATGTTAGAAAGATACTGAGCTCAAAACACCTGTTTTATAAGGAGATGTGTGCCTACCATAATGGGCAGAGGATACCAAACTTCCATGATCTTGACTTACAAGGTTATTCTTTGGATCATGGCAGGGACCCCAGAGATAACAATGCCTCTGAGGATGAAGCTGAGGATAACAATGAAAGTGATGATGATGATTTGGATAATGCACATGGGGATGGAGAGAGGGCGGATGAGTTCTGTCATAGAAGAAAATCGAGCGAGGAAGATTTCCATTTTTGGCCACAATCCATTGAGATGGATAAATTTGAAGTTGAAATGGCAAGGGTTTTTCAAGACCCAACGAAGTCAGTGAGGGAACGAAGAGAGTGGATCAAGATAAAGATGTTGCAGCTTCAAGAGCAAAGAGTGAGCTACCAAGTGCAAGCACTTGAACTCGAAAAACAACGATTTAAGTGGTTGAGATACTGCAGCAAGAAGGATAGAGAGCTGGAGAGGCTGAGGTTGGAGAACGAGAGGATGAAATTGGAAAATGAGCGCAGGGTCTTGAAACTGAAGCAGAAAGAGCAGGAAACAGATTTAACTGAAAGCATTGTCTCCCCGGTGTTCATCATCGTTGCCAAAACAATTGCCAAGCCAAGAAGACATCAGAATTGA 1416 0.4506 MNGNLGPLFAFVSLTRFGLQHCATERGHRSLQDFSLCSCLVLFLGGPGGGILDLEVPFHRHQQQSQMGHPSVTGQHHLNMRTDLENDHPIGLMELKGSNAGVNFGKGKGIASSNPANSNDLSDDDDAEDGNCENFDGGKSKKGSPWQRMKWTDNVVQLLIAVVSCVGDDGTINGTDGHKRKSGVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTCCQVVENPTLMDSMPNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNFHDLDLQGYSLDHGRDPRDNNASEDEAEDNNESDDDDLDNAHGDGERADEFCHRRKSSEEDFHFWPQSIEMDKFEVEMARVFQDPTKSVRERREWIKIKMLQLQEQRVSYQVQALELEKQRFKWLRYCSKKDRELERLRLENERMKLENERRVLKLKQKEQETDLTESIVSPVFIIVAKTIAKPRRHQN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01179 471 PANTHER TRANSCRIPTION FACTOR TRIHELIX FAMILY-RELATED 46 448 - -
Adu08g01179 471 MobiDBLite consensus disorder prediction 291 306 - -
Adu08g01179 471 MobiDBLite consensus disorder prediction 291 328 - -
Adu08g01179 471 PANTHER F16F4.11 PROTEIN-RELATED 46 448 - -
Adu08g01179 471 MobiDBLite consensus disorder prediction 307 321 - -
Adu08g01179 471 Gene3D - 151 223 - -
Adu08g01179 471 Coils Coil 382 402 - -
Adu08g01179 471 Coils Coil 410 446 - -
Adu08g01179 471 Pfam Myb/SANT-like DNA-binding domain 148 273 IPR044822 -
Adu08g01179 471 MobiDBLite consensus disorder prediction 106 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01179 Adu-Chr8 20772257 20774705 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu08g01179 Myb_DNA-bind_4 3.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01179 - - ccaj:109806698 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01179 08 20772257 20774705 Adu08g01179 08 20772257 20774705 ECH