Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01170 ATGACGTGTCCAGCCTCGCCCGAGCTCGATCTCGACAACCTCAAAGCACTCAAAATTCTAGGCAGAGGCGCCATGGGCACCGTCTTCCTCGTCCAAAACACAACCACCGCCACCTATCTTGCTCTCAAGGTGGTCGACAAGTCCTCTGTCGACGCAAAGCCAGACTCCGACCGCCGTGCCCGCTGGGAAACCCAAGTGCTGTCCCGCCTCTCCCACCCCTTCCTCCCTTCCCTCCTCGGCACCTTCGAAACAGACCACTTGCTTGGCTGGGGCGTTCCTTACTGCCCTGGCGGCGACCTCAACGTCCTCCGCCACCGCCAAGTGGACAGCGTCTTCTCCCCCGCCGTCATCCGCTTCTACGTGGCCGAGATCCTCTGCGCTCTCGACCACCTCCACTCCATGGGCATCGCCTACCGCGACCTCAAACCTGAAAACGTCCTCATCCAACAAACCGGCCACGTCACCCTAACTGATTTCGACCTCTCACGCAACCTCACTCTTCCAAAACCGAAAACGGTTCTCATAACTGATCCCAAGGCCTCTAACAGAAAACATGACACGTGTCACCACCAGAGCCAAAAAGGACTGAAGAAGCCTAAGTCCGCGCGAGTCAGTCCTGTTAGTCGCCGCAGGCCGAGTTTTTCCGCCGGAGAAAGGTCGAACTCCTTCGTCGGTACGGAGGAGTACGTGGCTCCGGAGGTGGTTCGCGGCGATGGTCACGAGTTCGCCGTCGATTGGTGGGCCCTAGGGGTGCTGACGTACGAGATGCTGTACGGAAGGACGCCGTTTAAGGGGAAGAACAGAAAGGAGACGTTTCGAAACGTGTTGATGAAGAAGCCTGAGTTCATCGGGAAGCAGACGGTGTTGACGGATTTGATCTCGCGGTTGCTGGAGAAGGAACCTTCTAGAAGATTGGGTTCCGTACGTGGAGCCGATGAGATCAAGGACCATGAGTTTTTCAGAGGTCTCAAGTGGGACCTCCTGACGGCGGAGGTGGTCATGAGGCCGCCGTTTATTCCATCCAGAGATGATGAAGCCCACTTCACGGAGAAACTGACTGGTGGCGGTGCCGCTGGCGGAGTGGACGTAAGGGATTACTTCCAGAGGTTGAAGGCTCCGCAGTCGCCTTCTTGCGAGCTTCACCGGAAGAATGTTTCGTGGGGAGAATTCTGA 1173 0.5729 MTCPASPELDLDNLKALKILGRGAMGTVFLVQNTTTATYLALKVVDKSSVDAKPDSDRRARWETQVLSRLSHPFLPSLLGTFETDHLLGWGVPYCPGGDLNVLRHRQVDSVFSPAVIRFYVAEILCALDHLHSMGIAYRDLKPENVLIQQTGHVTLTDFDLSRNLTLPKPKTVLITDPKASNRKHDTCHHQSQKGLKKPKSARVSPVSRRRPSFSAGERSNSFVGTEEYVAPEVVRGDGHEFAVDWWALGVLTYEMLYGRTPFKGKNRKETFRNVLMKKPEFIGKQTVLTDLISRLLEKEPSRRLGSVRGADEIKDHEFFRGLKWDLLTAEVVMRPPFIPSRDDEAHFTEKLTGGGAAGGVDVRDYFQRLKAPQSPSCELHRKNVSWGEF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01170 390 SMART serkin_6 14 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01170 390 Gene3D Phosphorylase Kinase; domain 1 14 98 - -
Adu08g01170 390 Gene3D Transferase(Phosphotransferase) domain 1 218 341 - -
Adu08g01170 390 Pfam Protein kinase domain 16 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01170 390 Pfam Protein kinase domain 217 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01170 390 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 9 374 - -
Adu08g01170 390 MobiDBLite consensus disorder prediction 180 219 - -
Adu08g01170 390 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Adu08g01170 390 SUPERFAMILY Protein kinase-like (PK-like) 11 342 IPR011009 -
Adu08g01170 390 PANTHER FLIPPASE KINASE 1-RELATED 9 374 - -
Adu08g01170 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Adu08g01170 390 ProSiteProfiles Protein kinase domain profile. 14 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01170 390 Gene3D Transferase(Phosphotransferase) domain 1 99 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01170 Adu-Chr8 20671988 20673352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01170 9 390 AGC Kinase Gene Family AT3G20830 59.314 9.83e-158 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Adu08g01170 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01170 - K08286 zju:107412708 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01170 08 20671988 20673352 Adu08g01170 08 20671988 20673352 ECH
Adu08g01170 08 20671988 20673352 Adu03g00346 03 3104861 3106573 PCT