Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01167 ATGACGGATACTTCAGTTTTCATGGGTACCGCAATTTTGGAGCCTCGGAATGATATGGAGTTTGAATCTCATGAGGCTGCATATGCATTTTACAAAGAATATGCTAAGTCTGCTGGGTTTGGTACTGCCAAGTTGAGCAGTCGTAGGTCTAGGGCATCCAAGGAATTCATTGATGCTAAATTTTCGTGTATAAGGTATGGTAATAAGCAGCAATCCGATGATGCCATTAATCCGCGGCCTTCTCCGAAAATTGGTTGTAAAGCAAGCATGCATGTGAAGAGAAGACAGGATGGTAAGTGGTATGTCTATAGATTTGAGAAGGATCATAATCATGAGCTTTTGCCTGCCCAAGCTCATTTCTTTCGGAGTCATAGGAGTTCTGATCCACTGAGTAATGATGTTCGGATGCGACGGAGGAAGAACTCAACTACCGTTTCTAAATTGTTTAGCGCGTATCAGAATGTTGATTGTTTAGAGAATTTCATGAAAAATCAACATGATCGTGGACGGAGTCTGATTTTAGAACCAGGGCATGCACAGTTGCTTCTTGAACTCTTCATGCAAATGCAGGAAGAGAATCCAAAGTTCTTCTATGCAGTTGATTTGAATGAAGAGCATCGACTGAGAAATGTGTTCTGGGTTGATGCTAAAGGCTTAGAAGATTATGCTTACTTTTCTGATGTTGTTTCCTTTGACACAACATATTTTACAAGCAAGTATAAAATACCATTGGTACTTTTCATTGGAGTAAACCATCATATTCAGCCAACATTGCTTGGCTGTGCATTGATTGCCGATGAGACTGTATATACTTTTGCTTGGTTGCTGCAAACATGGTTTATAGCAATGGAGGAACGAGCACCACAAGTTATTCTTACTGACCAAAATGATGCTATTAAAGCAGCTGTTGCTGCTGTTCTTCCAGGAACACGGCACTATTATTGTTTGTGGCAGATTTTGGAAAAGATACCAAAGCAGCTTGATTGTTTAGGCACGTGGCATGATAGCTTTATGGAGAAGTTCAACAAATGTATATATAAATCATGGACAGAAGATCAATTTGAAACGAGATGGTGGAAGTTAGTCGACAGGTTTAACCTTAGAGACGTTACGTGGGTCCAATCCCTGTATGATGATCGTGCATATTGGGTGCCTACATTCATGAGAGATATTTCTTTTGGTGGCTTTTCTACTAGTTCTCGCTCAGAGAGTTTAAATGCTTTTTTTGACAATTATGTCCAAGTTGATACTTCGTTGAGAGAATTTGTAGAACAGTACAGAGTTATTCTTGGAGACAGGCATGAAGAGGAAGCAAAGGCAAATTTTGATGCATGGCATGAAACACCTGAATTGAGGTCTCCTTCCCCTTTTGAAAAACAAATGTTATTAGTTTACACACATGAAATTTACAAAAGGTTTCAGGTTGAGGTTTTGGGTGCAGCTGCTTGCCATCTCAAGAGAGAGAACACTGGAGTGACTGAAACTTATTCTGTGAAAGACTTTGAAAACAATGAAAGCTATATGGTAGAATGGAACACGTCTAACTCAGATATATGTTGTTCATGTCGCTCATTTGAATATAAAGGCTATCTTTGTAGACATGCTATTGTTGTTCTACAAATGTCTGGTGTTTTCAGCATCCCATCAAAGTATATATTGCAGAGATGGACCAATGCTGCTTTGAGCAGGCATCCTATTGGTGAAAAGCTGGAAGAGGTTCAAGTCAAGGTCCGGCGATTCAATGATTTATGTCGACGGGCCATAATATTGGGTGAAGAAGGTTCTTTATCACAGGAAAGCTACTATCTCGCTTTAGGTGCAATAAGCGAAGCTTTAAAGCAATGTGCAAATTTGAGCAACCCTGTTGAGAATGAAACAAGAGCTGATGCCTCAGCTACCCATGTTGTTTGTAATGATGAAGAGTATCAATCTATTATTTCATCTAATAATATAACCCCTGTTCCAAAAATTAATACAAGTAATAAGGTTGCGAGGACTCTTGCAGCTTGTAGGAATCTCGGAAGCACAGAAAATGGTGAACGAAATAAAGAGAAGGTTTCCCAGCTTGAAGCAGCATGTGTGAAAGATGGTTTTCAACAAGTGGATCCAACTGATTTGACTCCTCCACATACTGCCATCCCCATGCAGTTTCACAGTATGATTCCAGCCCTGTTCCACAATCACAACGTTTCACCGGCACAGTTTCATGCTCATTTGCATGAAACTCATCATACCAAAGACAATGTATAA 2250 0.3982 MTDTSVFMGTAILEPRNDMEFESHEAAYAFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYRFEKDHNHELLPAQAHFFRSHRSSDPLSNDVRMRRRKNSTTVSKLFSAYQNVDCLENFMKNQHDRGRSLILEPGHAQLLLELFMQMQEENPKFFYAVDLNEEHRLRNVFWVDAKGLEDYAYFSDVVSFDTTYFTSKYKIPLVLFIGVNHHIQPTLLGCALIADETVYTFAWLLQTWFIAMEERAPQVILTDQNDAIKAAVAAVLPGTRHYYCLWQILEKIPKQLDCLGTWHDSFMEKFNKCIYKSWTEDQFETRWWKLVDRFNLRDVTWVQSLYDDRAYWVPTFMRDISFGGFSTSSRSESLNAFFDNYVQVDTSLREFVEQYRVILGDRHEEEAKANFDAWHETPELRSPSPFEKQMLLVYTHEIYKRFQVEVLGAAACHLKRENTGVTETYSVKDFENNESYMVEWNTSNSDICCSCRSFEYKGYLCRHAIVVLQMSGVFSIPSKYILQRWTNAALSRHPIGEKLEEVQVKVRRFNDLCRRAIILGEEGSLSQESYYLALGAISEALKQCANLSNPVENETRADASATHVVCNDEEYQSIISSNNITPVPKINTSNKVARTLAACRNLGSTENGERNKEKVSQLEAACVKDGFQQVDPTDLTPPHTAIPMQFHSMIPALFHNHNVSPAQFHAHLHETHHTKDNV 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01167 749 Pfam SWIM zinc finger 513 541 IPR007527 GO:0008270
Adu08g01167 749 CDD NTF2_like 353 442 - -
Adu08g01167 749 Pfam FAR1 DNA-binding domain 30 115 IPR004330 -
Adu08g01167 749 ProSiteProfiles Zinc finger SWIM-type profile. 507 543 IPR007527 GO:0008270
Adu08g01167 749 Pfam MULE transposase domain 228 321 IPR018289 -
Adu08g01167 749 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 706 IPR031052 GO:0006355
Adu08g01167 749 SMART 26again6 518 545 IPR006564 GO:0008270
Adu08g01167 749 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 3 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01167 Adu-Chr8 20636439 20640345 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu08g01167 MULE 5.2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01167 - - adu:107461496 1531.54