Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01166 ATGGAGTCAGATCTTCAGGCACCGAGTTCGAACGGGTTGACACGGTACCGATCGGCACCGAGTTCATACTTCACGGACATAATTGACCGCGAATTCTACGAGCACATTTTCAACCGTCCGTCAAGTCCAGAAACAGAGCGAGTCTTCTCCAGGTTCATGAACAGTCTCCGTGACGATGCTGCACCTGAAGACGATTCACTCCATCTCGATTCTTCTTCTGTCAAAGAAGAACACGATATCACTCCCTCGCAACCTCTTCTTTTTCAACACCAGCAGCAGCAGCAGCAGAACAACGTCAATAGCTTCAACTATCAAAGCACGTCGAGACCGCCGTTGCCGAATCAGAATCAGAATCTTGCTTCCTCCGGTGGTGTAGAAGGAGTGTATTCTAATAATAATAATAACAATAATCGGTTGCCGCAGATGAAGAATCAATCTAATCTTGTTAGGCACAGTAGCTCACCTGCTGGACTATTTTCCCAAATTCACATTGAAAATGGGTATGTTGTTGATATGCGAGGGATGGGAACTTTAGGAGCAGTAAATAAGAGTGTGGAAGAAGTGAAGTTCTCTTCTTCAAGGACAAGGAGGTTGAAGAATCCACAGAACTACTCCTCCTCCGCCTCCGGGAGAATGTCTTCAATAGCTGAGATTGGCAACAGGGATAGCAGAGAAGACAATCCAGATGCTGAAGCTTTTGGAGAAACCCACGGCGAGGATTTCATCACGGAGTTCGCGCCCTGGGATGATTCCGTCGCCGTGAATGACATTGTTGCTGGTCTAAAAAGATTCAGAGATGATGATGTGAAGCCATTTTCTTCTGGTTTGAATGCAGCTGAGACTCAGAACGAAAGTAGAGGACAGCAAGCTGCTCCTTTGGCTCATCAAATGAGTTTGCCAAATACTTCAGCTGAAATGGCAGCCATTGAGAAGTTCTTGCAATTTTCAGATTCTGTTCCGTGCAAAATTCGTGCCAAGAGAGGCTGTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAAATAAGTGAGCGTATGAGGAAACTACAAGATCTGGTGCCTAACATGGACAAGCAAACAAACACAGCAGACATGTTGGATTTGGCTGTCGATTACATCAAAGACCTTCAAAAGCAAGTTGAGACGCTTTCAGACTGTCAAGCTAAGTGTACGTGTTCTTCCAAGCCACAGCAATAA 1206 0.4561 MESDLQAPSSNGLTRYRSAPSSYFTDIIDREFYEHIFNRPSSPETERVFSRFMNSLRDDAAPEDDSLHLDSSSVKEEHDITPSQPLLFQHQQQQQQNNVNSFNYQSTSRPPLPNQNQNLASSGGVEGVYSNNNNNNNRLPQMKNQSNLVRHSSSPAGLFSQIHIENGYVVDMRGMGTLGAVNKSVEEVKFSSSRTRRLKNPQNYSSSASGRMSSIAEIGNRDSREDNPDAEAFGETHGEDFITEFAPWDDSVAVNDIVAGLKRFRDDDVKPFSSGLNAAETQNESRGQQAAPLAHQMSLPNTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVETLSDCQAKCTCSSKPQQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01166 401 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 60 - -
Adu08g01166 401 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 93 398 - -
Adu08g01166 401 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 93 398 - -
Adu08g01166 401 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 11 60 - -
Adu08g01166 401 MobiDBLite consensus disorder prediction 59 141 - -
Adu08g01166 401 MobiDBLite consensus disorder prediction 59 77 - -
Adu08g01166 401 MobiDBLite consensus disorder prediction 195 212 - -
Adu08g01166 401 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 379 IPR011598 GO:0046983
Adu08g01166 401 MobiDBLite consensus disorder prediction 192 212 - -
Adu08g01166 401 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 332 391 IPR036638 GO:0046983
Adu08g01166 401 Pfam Helix-loop-helix DNA-binding domain 334 380 IPR011598 GO:0046983
Adu08g01166 401 SMART finulus 335 385 IPR011598 GO:0046983
Adu08g01166 401 MobiDBLite consensus disorder prediction 84 141 - -
Adu08g01166 401 Gene3D - 330 398 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01166 Adu-Chr8 20624923 20627870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01166 6 397 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 40.404 3.41e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g01166 HLH 5.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01166 - - gmx:100805812 493.812