Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01140 ATGACCCGAACAAGCGATAGGATCAAGTCAAGGACTAAACTTTGTGTACGACCAAGATTGGATTGCAGCTCAAATCTTATGGGCAACAAGAAAAGCAAGAACAGGAGAAGGACGACAGCTTTGCGAATTACCAAAATCTTGTGTCCTGGGAATCGGCACCTGCAAGATTTGGATTCTAACTCTGGCTTTGCCAGTCTTCGATGTTCAACAAGGGAGAGAAGGACTGTGAATTGTGTAGATTACACTGATAGTTCTGAGGCCAAGGTCAAAGGCATAGTGGTGAGGTTTTGTACTCTATCTAGTAGAAACCAGATGAACAATAGTTTCAATCAGCACAAGATGATGTGTTATAAGCGCAAAAGAGCTCTGAAGACTACATCGACCCCTGGACGTGAAGGTCTAAGACCTAGCCATTTGACAAGGGCTACTGTAGGGCAACAATTGATTTCGGAATCAGATGATAAACAGGAACTTGCAGAAGAGAAGAAGGTTGGGAAAGATGAAACAGAAAATGGAAATGTTGATGGTGAGAATGAGATTGATGAAGATGTTGAGGATGTAGGAAATGAAGATGGTGATGATGAAGGTGGCAAAGAAGAGCAGGTTGGGAGAAGACGTTACGATCTTCGGAATCGTCCAGATGTCCGCAGGTCCTCCATGGCAGAATGTAAGATCCAACCGAGATCTCCACAAAGAGTGCTACATCAAGGCATGGGCACTAAGGTTAAAAAGGGTGTAAAGAAGGGTGGATCACGAGTGCAGAAGCGTTGTTGGTTAAGGCCTGCATATTCTGATGATTCCCGTATTGTGGATGAGCTGAACCAATATCCTGCTATTCCATGGGGTCATGGGGACAGCAGACCTTGCCAACCATGGCTTTTTGGAGGATTAGACATGCATGGGATAACAACTTGGGGATTAAATGTTGCTGCCTCAGGTTGGGTTCATGAAGGAGATGCTTTTTCCACCTCGGTAACTGGGGTTCAAACTGCTGGACCAAGCTCTAAGGGTGGGGCAGATATCCAACCTTTGCAGGTCGTCGATAGTGCCAGTTTTGATGATATAGGGGGGCTCTCTGAGTACATTGATGCTTTGAAGGAAATGATTTTCTTTCCCTTGTTGTATCCCGAATTCTTTGCAAGTTATCATATCACACCACCTAGGGGGGTGTTGTTATGTGGCCCCCCTGGCACAGGCAAAACTTTGATTGCAAGAGCTCTGGCTTGTGCTGCTTCAAAAGCTGGCCAGAAGGTCAGCTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAATGGGTTGGTGAGGCTGAAAGACAACTGAAACTACTTTTTGAAGAAGCTCAAAAGAACCAACCTTCTATCATATTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAGCAGATTCATAATTCCATTGTTTCCACCTTGCTAGCTTTGATGGACGGTCTTGATTCTCGTGGACAAGTTGTTCTGATTGGAGCCACCAACAGGATTGATGCCGTTGATGGAGCCTTGCGGCGCCCTGGTAGATTTGATCGGGAATTTAAGTTTCCATTGCCTGGTTGTAAGGCACGTTCTGAAATATTAGACATCCACACACGCAAGTGGAAACATGCTCCTTCAAATGAACTGAGAATGGAACTTGCATCTAGTTGTGTAGGATATTGTGGTGCCGACCTAAAGACCCTCTGTACTGAAGCTGCTATTTGTGCATTTCGTGAAAAATATCCACAAGTCTATACTAGTGATGACCAATTTCTCATAGATGTTGATTCAGTCAAGGTTGAAAAGTATCACTTTACTGAAGCTATGTCAACAATTACTCCTGCTGCTCATAGGGGTGCAATTGTGCACTCTAGGCCATTGTCTCTAGTTGTTCGACCATGTCTTCGCAGGCATCTAGAGGCAGCCATGGGTATTGTATCTGATATTTTCCTTCCAGTTTCAGTTGCATCAGAATTTATTAAACAATCAACGCATTCCTTTGGGCGCGCAATTCCACTTGTGTATCGACCTAGACTTCTACTTTGTGGAAGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCAGTTTTACATGAACTGGAAAAGTTTCCTGTTTTTTCATTAGGTATTTCAGTTCTTGTATCAGATTCAAGTGCAATAACACCAGAGGAGGCATTGATTCATATATTTAATGAAGCTAGACGAACAATACCGTCAATTCTCTATTTACCACAGTTTGATGTGTGGTGGGAAACTGCACATGAACAGCTCCGGGCTGTTCTCCGAACCTTACTAGAAGAATTGCCATCTGACTTGCCTATATTACTGTTTGGAACATCATCAGTCCAGCTTGCTGAAGTTAAAGAAGTGCCTATTTCAGTTTTCCCTCATGATTCAGTTTATCAAGTGAACATACCATCAGCCGAAGATAGGATGCTGTTTTTTAATGATTTAGTGGAAGCTGTTTTGTCGGTCTTTTCTGGGATAATGAACAAGAAACCCCTGGACACAGGATGCTTTTCTGAACTTCCCAAGGCACCTAAACTAGCAAGTGGTCCAAAGGCATCCGAACTTAAAGCAAAGGTGGAAGCTGAGCAACATGCACTCCGCAGATTGCGAATGTGCCTTAGAGATGTTTGTAACAAGATATTATATGACAAGCGATATAATCTCTTCCATTATCCAGTCTCAGACGAAGATGCTCCTAATTATCACTCAATTATCCAGAACCCGATGGACATGGTAACCATGTTACAGCGTGTTGATAATGGCTGGTATATTACACGTTCTACATTCCTACAGGACATTGATCTTATTGTTTCCATTGCAAAGGTATGCATCCTGTGGCCTTTAACTTGGCTGGGTCCTATCCACTGTCCATTCTTGTGA 2892 0.4353 MTRTSDRIKSRTKLCVRPRLDCSSNLMGNKKSKNRRRTTALRITKILCPGNRHLQDLDSNSGFASLRCSTRERRTVNCVDYTDSSEAKVKGIVVRFCTLSSRNQMNNSFNQHKMMCYKRKRALKTTSTPGREGLRPSHLTRATVGQQLISESDDKQELAEEKKVGKDETENGNVDGENEIDEDVEDVGNEDGDDEGGKEEQVGRRRYDLRNRPDVRRSSMAECKIQPRSPQRVLHQGMGTKVKKGVKKGGSRVQKRCWLRPAYSDDSRIVDELNQYPAIPWGHGDSRPCQPWLFGGLDMHGITTWGLNVAASGWVHEGDAFSTSVTGVQTAGPSSKGGADIQPLQVVDSASFDDIGGLSEYIDALKEMIFFPLLYPEFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAVDGALRRPGRFDREFKFPLPGCKARSEILDIHTRKWKHAPSNELRMELASSCVGYCGADLKTLCTEAAICAFREKYPQVYTSDDQFLIDVDSVKVEKYHFTEAMSTITPAAHRGAIVHSRPLSLVVRPCLRRHLEAAMGIVSDIFLPVSVASEFIKQSTHSFGRAIPLVYRPRLLLCGSEGTGLDHLGPAVLHELEKFPVFSLGISVLVSDSSAITPEEALIHIFNEARRTIPSILYLPQFDVWWETAHEQLRAVLRTLLEELPSDLPILLFGTSSVQLAEVKEVPISVFPHDSVYQVNIPSAEDRMLFFNDLVEAVLSVFSGIMNKKPLDTGCFSELPKAPKLASGPKASELKAKVEAEQHALRRLRMCLRDVCNKILYDKRYNLFHYPVSDEDAPNYHSIIQNPMDMVTMLQRVDNGWYITRSTFLQDIDLIVSIAKVCILWPLTWLGPIHCPFL 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01140 963 Gene3D - 526 611 - -
Adu08g01140 963 MobiDBLite consensus disorder prediction 174 196 - -
Adu08g01140 963 Pfam Bromodomain 878 944 IPR001487 GO:0005515
Adu08g01140 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 674 889 IPR027417 -
Adu08g01140 963 SMART bromo_6 870 951 IPR001487 GO:0005515
Adu08g01140 963 SMART AAA_5 386 527 IPR003593 -
Adu08g01140 963 PANTHER BNAC08G44480D PROTEIN 3 946 - -
Adu08g01140 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 614 IPR027417 -
Adu08g01140 963 Pfam AAA+ lid domain 553 589 IPR041569 -
Adu08g01140 963 Pfam ATPase family associated with various cellular activities (AAA) 390 525 IPR003959 GO:0005524|GO:0016887
Adu08g01140 963 Gene3D - 349 618 IPR027417 -
Adu08g01140 963 ProSitePatterns AAA-protein family signature. 495 513 IPR003960 GO:0005524|GO:0016887
Adu08g01140 963 MobiDBLite consensus disorder prediction 153 173 - -
Adu08g01140 963 CDD AAA 386 525 - -
Adu08g01140 963 Gene3D - 653 819 IPR027417 -
Adu08g01140 963 SUPERFAMILY Bromodomain 866 942 IPR036427 GO:0005515
Adu08g01140 963 PANTHER AAA DOMAIN-CONTAINING 3 946 IPR045199 -
Adu08g01140 963 Gene3D - 862 946 IPR036427 GO:0005515
Adu08g01140 963 ProSiteProfiles Bromodomain profile. 893 946 IPR001487 GO:0005515
Adu08g01140 963 MobiDBLite consensus disorder prediction 124 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01140 Adu-Chr8 20234625 20241331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01140 338 590 Calmodulin-binding Proteins AT3G56690 36.502 1.67e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01140 K22531 - gmx:100787765 1338.17