Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01133 ATGCCCGATAAGCGTGAAAAAATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTTAGTTCCGGTAAATGGGTTGTCACAAAGTTTGTAAAGGAGCACACACACCCTTTGACACCTGGAAAAGGCAGAAGGGATTGCATTTATGAACAATATCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAATTGGCTATAGAGAAAAAACGGTGTGCAGCTTATAAAAGGCAACTTGAATTGTTATTTGAACACATTGAGGAGCATAATAATAGTCTTTCAAAGAAAATACAGCACATAGTAGGCAATGTGAAGGAGATTGAAGCTGAAGAACAACAGCGTCATAGATAG 378 0.3942 MPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRCAAYKRQLELLFEHIEEHNNSLSKKIQHIVGNVKEIEAEEQQRHR 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01133 125 Coils Coil 67 87 - -
Adu08g01133 125 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 123 - -
Adu08g01133 125 Pfam FAR1 DNA-binding domain 5 47 IPR004330 -
Adu08g01133 125 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01133 Adu-Chr8 20191073 20191996 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu08g01133 FAR1 7.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01133 - - adu:107461550 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01133 08 20191073 20191996 Adu08g01133 08 20191073 20191996 ECH
Adu08g01133 08 20191073 20191996 Adu03g00380 03 3455758 3458088 PCT