Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01126 ATGGCACTCAATACATACGTGAATGGAGATGCACTTCAAAATTCAATAATATCAGAAATTTTCACCACCAATTTTCATGAACTAACTGCACCAAAAGAACTTACACCTGACTATTATTACCACCAACACAACCAAGAAGGCTTGTTTCCTAATAACTTTTTCTTTGACCCTTATTTTGACCTTAACAATGGATTTTTCCATCCTGAAATTTTGTCTTATCATCAACTTGGTCTTAGTTGCACTTCTTCTCATGACCTATTTATCTCACCCAATAAGACTGAATACTCTAATGTCAATACTATTTTTTCATCTCCCAAACGCCAAAAGTACTTTCACAAGGATGAGGATGAAGAACGCCAACTGCCTCCTCCATTCAAGGAGTATTCATCGCCCAACCTATTTGATGGGTTTACAATGAATTCATCTTCTCTGTTACCATCAGAAGGAGCTGCACTACCAGAAGAACTACTATTACCCGCAGCAGTAGCAACACCGTCATCAGACTTCATGGTTCCTAATGTTGTACTCAATAGTTTTTGTGTGGGAATTAATAATGACAGTAAGAAGAAGAAGAACAGTGAGAGAACTATCTCTGCACAAAGCATAGCGGCAAGGGAGAGGAGAAGGAAGATCACAGATAAGACACAAGAGCTTGGAAAGTTGGTTCCTGGTGGATCAAAGATGAACACAGCTGAGATGCTCCATGCAGCTTCTAAATATGTGAAGTACCTTCAAACTCAAATTGGTATGCTTCAACTTATGAACACACTCCAGAAAGAAGATGAGGTTGCTCCTCCAAGTGAAGATCTACGTGCTCTTATTACTTCTCCCTGTGTTCAAGAGAATCTTTATTCTGAGGAACTATGCTTTGTCCCTAAAGACTTTGTTACAGCTTTGACAAATCAGCGTGATATTCGATCAAAGCCTACCATCTTTAAGGATCTTAAAGAGTTGATTGAAACAAACAATGTGCAGAAGAAAGCATAG 987 0.387 MALNTYVNGDALQNSIISEIFTTNFHELTAPKELTPDYYYHQHNQEGLFPNNFFFDPYFDLNNGFFHPEILSYHQLGLSCTSSHDLFISPNKTEYSNVNTIFSSPKRQKYFHKDEDEERQLPPPFKEYSSPNLFDGFTMNSSSLLPSEGAALPEELLLPAAVATPSSDFMVPNVVLNSFCVGINNDSKKKKNSERTISAQSIAARERRRKITDKTQELGKLVPGGSKMNTAEMLHAASKYVKYLQTQIGMLQLMNTLQKEDEVAPPSEDLRALITSPCVQENLYSEELCFVPKDFVTALTNQRDIRSKPTIFKDLKELIETNNVQKKA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01126 328 Gene3D - 191 264 IPR036638 GO:0046983
Adu08g01126 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 315 - -
Adu08g01126 328 CDD bHLH_AtbHLH_like 200 252 IPR045239 -
Adu08g01126 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 256 IPR036638 GO:0046983
Adu08g01126 328 Pfam Helix-loop-helix DNA-binding domain 201 245 IPR011598 GO:0046983
Adu08g01126 328 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 1 315 - -
Adu08g01126 328 SMART finulus 201 250 IPR011598 GO:0046983
Adu08g01126 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01126 Adu-Chr8 20120203 20122533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01126 163 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 45.000 1.36e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g01126 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01126 - - aip:107610272 516.924