Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01112 ATGCAAAGCACAGCTAGGAGGAGGCTAATACGGCTGCGGGATGAAGAGGCAAAGGGGGTAGAGCAGCAAAACAAGCTCACCACTACCGGAGCACAGCCCGCAATAAGCAGAGAGGAGAGTCGGTGGGAAACGGAGATGATGTGCGACGGTGacacgttccaccgtgtctatgtcttggcaagacatggacatCAAACAAACGGAGTGAAAGTGCACGATGCCTGGTTTGCTGACGAAGATCGAGTCCGTAAAACAGTTGGTTTGTTGGAGAAGCCAGTTGTCCAGCATCCTAATCCTAGAGAGCTAACTTGTGGCATCTGTTTTGAAACGTATCCTCGTACTAAGATTCAAACTGCTACTTGTGGCCAATCCTTATTGTTTTTCTTGCTGGGCAGGATATATTAG 405 0.4395 MQSTARRRLIRLRDEEAKGVEQQNKLTTTGAQPAISREESRWETEMMCDGDTFHRVYVLARHGHQTNGVKVHDAWFADEDRVRKTVGLLEKPVVQHPNPRELTCGICFETYPRTKIQTATCGQSLLFFLLGRIY 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01112 134 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 58 124 IPR031127 GO:0004842|GO:0016567
Adu08g01112 134 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 58 124 - -
Adu08g01112 134 MobiDBLite consensus disorder prediction 17 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01112 Adu-Chr8 19954119 19955157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01112 58 125 C3H Transcription Factor Family AT2G31510 55.882 5.72e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01112 K11968 - gmx:100795162 103.605