Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu08g01094 | ATGTCTAGCACTACAGCTGGTCAAGTCATCAAGTGCAGAGCTGCGGTTGCATGGGAAGAAGGGAAGCCACTGGCCGTAGAAGAAGTAGAGGTAGCACCACCAGAGGCTGGTGAAGTTCGCTTGAAGATCCTCTACACTAGTCTTTGTCATTCTGATCTCTACTTCTGGAAGAGCAAGGGGGGTAGGAATTTGTTGTTTCCTCGCATACTCGGTCATGAAGCTGCAGGGATTGTGGAGAGCATAGGGGAGGGTGTGACAAATCTGAAGCCAGGAGATCATGTGCTACCTGTGTTCACCGGAGAGTGTGGCGAATGCCGAAGCTGCAAGTCTGAAGAGAGCAACCTCTGTGAAGTCCTCAGGCTCAACACTGATACTGGTGTCATGCTAAGTGATGGAAAATCAAGATTCTCCAAAGATGGAAAACCCATTTACCACTTCCTTGGAACTTCCACATTCAGTGAATACACTGTCTCACATGCTAAGTGTGTTATAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTGTTCTCAGTTGTGGAATCTGCACAGGACTTGGTGCAACCTTAAATGTGGCAAAACCAAAGCCCGGTTCTACTGTTGCTGTCTTTGGATTGGGAGCAGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGCTTGCTAGTGCATCAAGAATCATTGGAGTTGATATACTTTCCAGCAGACAGGAACAGGCCAAAAGTTTTGGAATCACTGACTTTGTGAACCCAAAAGATCATGACAAACCTGTGCAACAGGTAATTGTTGAAATGACCGATGGAGGAGTTGATCGCGCTCTAGAATGCACTGGACACGTAGAAGCCGCGATTGCAGCATTTGAATCTGTTCATGATGGTTGGGGTGTTGCTGTGCTTGTTGGGCTGCCAAGCAGTGAAGATGAATTCAAAACAAAATCCATCAACTTATTGTATGAGAGGACTGTTAAGGGTACCTTCTATGGAAACTACAAACCACTCTCTGATATTCCCTCTGTTGTGGAGAAGTACATGAACAAAGAGCTAGAATTGGAGAAATTCATCACTCACTCAATCCCATTCTCTGAGATCAATAAATCATTTGATTTAATGCTGAAAGGAGAGTCAATTAGGTTCGAAATTTCCGGCGCCGGTGGCCAGGATGAAGACGTTGATGTTGATGGGTTTTTTCTGGGTTTGTGGCGAATTGAATTGGGTCGGTTTAAGAAAGTGGCGAAGATGAACTTGGGTGCTGCCAAGGAAGAATCGACACCAGAGGTTCATGTCCCAGCCGATATTGATTGGCAGAAGCTCGATAAATCCAAGTTCTTCTTCCTCGGCGCAGCACTTTTCTCTGGGGTTTCAGCAGCACTGTACCCCGTTGTGGTATTGAAAACGAGGCAGCAAGTTGCTCAGTCCCAAGTTCCTTGCATCAAGACTGCATTTTCAGTGATTAGCCATGAGGGTTTTCGAGCATTGTATAGAGGGTTTGGTACCTCTTTGATGGGAACAATCCCTGCTAGAGCCATGTACATGGCTGCTTTAGAGATCACTAAGAGTAATGTAGGCACTGCCACTGTTAGGTTTGGGATAGCTGAGCCGACTGCAGCCACGATCGCCAATGCAGTGGCCGGACTGAGTGCAGCCATGGCAGCTCAGCTTGTGTGGACCCCAGTCGACGTAGTGAGCCAGAGGCTAATGGTTCAAGGTGGTTCCAATGCAAGACAATATGCCAATGGGATTGATGCATTCAGGAAGATTCTCAGAACAGATGGTCCTAGAGGGTTGTACAGAGGTTTTGGGATATCAATTTTGACATATGCACCTTCAAATGCTGTTTGGTGGGCTTCATATTCTGTTGCACAGAGAATGGTTTGGGGTGGTGTTGGATACTACTTGTGCAGCAATAAGAAGGATGATGGTGAGACGACAAACGAACTGAGGCCGGATTCGAAGACAGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCTGGTGGCATGTCCGCATTAATCACCATGCCATTGGATACAATTAAGACAAGGCTGCAGGTCTTGGATGGTGATGAGAATGGCAATGGGCGTAGAGTACCAACGGTTGTTCAGACAGTGAGGAATTTAGTTAAGGAAGGTGGTTGGATGGCATGTTACAGAGGTTTGGGACCAAGATGGGCTTCAATGTCTTTGTCTGCAACAACAATGATCACTACTTATGAGTTCCTTAAACGACTTTCTACAAAGAATCAGGATGTTTTGACATGA | 2253 | 0.4652 | MSSTTAGQVIKCRAAVAWEEGKPLAVEEVEVAPPEAGEVRLKILYTSLCHSDLYFWKSKGGRNLLFPRILGHEAAGIVESIGEGVTNLKPGDHVLPVFTGECGECRSCKSEESNLCEVLRLNTDTGVMLSDGKSRFSKDGKPIYHFLGTSTFSEYTVSHAKCVIKINPAAPLDKVCVLSCGICTGLGATLNVAKPKPGSTVAVFGLGAVGLAAAEGARLASASRIIGVDILSSRQEQAKSFGITDFVNPKDHDKPVQQVIVEMTDGGVDRALECTGHVEAAIAAFESVHDGWGVAVLVGLPSSEDEFKTKSINLLYERTVKGTFYGNYKPLSDIPSVVEKYMNKELELEKFITHSIPFSEINKSFDLMLKGESIRFEISGAGGQDEDVDVDGFFLGLWRIELGRFKKVAKMNLGAAKEESTPEVHVPADIDWQKLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVAQSQVPCIKTAFSVISHEGFRALYRGFGTSLMGTIPARAMYMAALEITKSNVGTATVRFGIAEPTAATIANAVAGLSAAMAAQLVWTPVDVVSQRLMVQGGSNARQYANGIDAFRKILRTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCSNKKDDGETTNELRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGNGRRVPTVVQTVRNLVKEGGWMACYRGLGPRWASMSLSATTMITTYEFLKRLSTKNQDVLT | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu08g01094 | 750 | PANTHER | ALCOHOL DEHYDROGENASE-RELATED | 5 | 378 | - | - | |
| Adu08g01094 | 750 | PANTHER | ALCOHOL DEHYDROGENASE | 5 | 378 | - | - | |
| Adu08g01094 | 750 | Pfam | Zinc-binding dehydrogenase | 208 | 328 | IPR013149 | - | |
| Adu08g01094 | 750 | Gene3D | Mitochondrial carrier domain | 440 | 748 | IPR023395 | - | |
| Adu08g01094 | 750 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 171 | 344 | IPR036291 | - | |
| Adu08g01094 | 750 | CDD | alcohol_DH_plants | 10 | 375 | - | - | |
| Adu08g01094 | 750 | Pfam | Mitochondrial carrier protein | 653 | 745 | IPR018108 | - | |
| Adu08g01094 | 750 | Pfam | Mitochondrial carrier protein | 535 | 622 | IPR018108 | - | |
| Adu08g01094 | 750 | Pfam | Mitochondrial carrier protein | 449 | 518 | IPR018108 | - | |
| Adu08g01094 | 750 | Gene3D | - | 185 | 323 | - | - | |
| Adu08g01094 | 750 | SUPERFAMILY | Mitochondrial carrier | 433 | 738 | IPR023395 | - | |
| Adu08g01094 | 750 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 436 | 518 | IPR018108 | - | |
| Adu08g01094 | 750 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 650 | 741 | IPR018108 | - | |
| Adu08g01094 | 750 | Gene3D | - | 21 | 372 | - | - | |
| Adu08g01094 | 750 | SUPERFAMILY | GroES-like | 331 | 376 | IPR011032 | - | |
| Adu08g01094 | 750 | SUPERFAMILY | GroES-like | 5 | 188 | IPR011032 | - | |
| Adu08g01094 | 750 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 533 | 621 | IPR018108 | - | |
| Adu08g01094 | 750 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 71 | 85 | IPR002328 | GO:0008270|GO:0016491 | |
| Adu08g01094 | 750 | Pfam | Alcohol dehydrogenase GroES-like domain | 37 | 166 | IPR013154 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu08g01094 | Adu-Chr8 | 19812820 | 19818474 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu08g01094 | 411 | 747 | Chloroplast and Mitochondria Gene Families | AT1G72820 | 74.927 | 0.0 | 520 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu08g01094 | K18857 | - | ming:122088951 | 583.563 |