LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g01093	ATGCACAGGAATGATGCTGAATTCATTGAAGAAATTGTGAAACATGTGTTGCAAAGGTTGAACCAAGAATACCAATGTGATCCAAAAGAATTTGTTGGAATTCATGAACCAATTGTAGAGCTAGAATTAGTATTGTGCAGGGAATCGAAAGCTGTTCTTGTTGTCGGACTTTGGGGCATGGGCGGTATTGGATTACATTCATCAAATTTTGGGAATGATGCTGAATTCATTGAAGAAATTGTGAAACGTGTGTTGCAAAGGTTGAACCAAGCATACCAATGTGATCCAAAAGAATTTGTTGGAATTCATGAACCAATTGCAGAGCTAGAATCAGTATTGTGCAGGGAATCGAAAGCTGTTCTTGTTGTCGGACTTTGGGGCATGGGCGGTATTGGTAAGACAACTCTAGCTAGTAATATTTTCAACAGATTGCAATATGAATTTCAAGGTGTATGCTTTTTGGAGAATGTAAGGGAGAGAGTTCAGAGATATGGCATGACTCATTTGAAGAAAGAGCTTCTTTCTAAACTACTAGAGGAAAAAGATGTAGTCCCTTTCATCATGCCTGATGGAATAACCAATTTTGCCAAAAGAAGACTTAGTCgaaaggcaattcttcttgttcttgatgatgtcaatgatccagaccaattggaagatttatgtggaagagggtttgaatggtttggaccaactactagaattatagtaacaactagggataagcatgtattacttgttaaacaagttgatcacatacatgaggttaagccattgaatgacgatgaatctctcaagctttttaatttgaatgccttcaaacaaaactatgacattgaaagagaccaagatcatgctgagctggccatgaagctggttacttatgctaatggcattccattggctttgaaagttttgggctcctctctttatggaagaagcaaagaagagtgggaaagtcaactgtctaaacttgagaaaattcctcatgtcaaaattcagaatatattgagagtgagttacaatgacttggatcgtcatgatcaaaatatttttttatacattgcatgtttctttgaaACAGATAATGCAGAACAGATAAAATGTCTACTTGATTCTTGTGGATATTCAACAGCCATTGGGTTGAGAAATCTTCATGATAAAGCTCTTATTTCCATTGCACCAAAAAGTATGGCAATGCATGATTTGATTCGTGACATGGGCCGCGAAGTAGTTCGCGAAGAATCTCCGAGTAATCCTGGAAATCGTAGTAGATTATGGGATCCCGTTGACATCTATGAAGTATTGAAATATAACAGGGGAACTGAAACTATTGAAAGCATAACATTAGACATGTCAAAAATTGACATGCTAAGCTTGCATCCTCAGATATTTGCAAGAATGTACAAGCTCAAGTTTTTAAATGTTCATTCATGGGATGGTGAGCATAGGCTCTGTGCTCCTCATGGTATTGAATCCTTGTCAGATGAGCTGAGATTTTTTCAATGGGAAGACTACCCTTCGAAATCTTTACCATTGTCTTTTTGTGCGGAAAATCTTGTGGAAATTATAATGCCGTCTAGTCAGTTGGAGAAGCTTTGGGAAGGTGTCCAGAATCTTGTAAATCTGAAGCTAGTAGATCTTAATTATTCATCACACCTAGTCGAGCTCCCAGATTTCTCCAAGGCCCCAAATCTTGAAGAAGTAAATGTTTCCAACTGCAAGAGTCTGCAGCAAGTTCCCCAATCTGTTTTGTCTTCTCAAAAGCTGGGTTATCTCTTTCTAAATGATTGTAATGAACTAAGAAGTTTCCAGCACAACATTCATCATCAATCTCTTAAGACACTCTCCTTCCATAGCTGCATTGGTCTCAGAGAGTTCTCGTTGACACAGCTTAACCACGGCACAGACAAATTGGTGTTATCAGCTCCGCTTGAACGGCTAAAACTGGATTACTGTTCCAACCTTTCTCTGCTGCCAGACAATATAAGCATGCTTTCATCATTGAAGGACTTATCAATGTGTCACAGCAGTGTGAGAAGCTTGCCCGAAAGCATTAAGCATCTGTCACGGCTGAAATACCTCAACTTGAGTAATTGCGAGAAGCTTCAATCAATACCAGAGCTTCCATTGTCCATTTTGGTTTTAATTGCTGTTAACTGCACATCATTACATACTGTTTTCATGGCTGAACCAATCAAAGAAGAGAATTTCGGATATAAAACATTTGCATTTACCAATTGTGTTAAGTTGGAGAAGGCTACAATCCAGGCCATTATGGCAAACGCCTATGTCAGAATACAGCAAGCAGCAAACGCATGGCTACCAACAGCACAGAGGAATGAGTACTATTATGCAAACTTTGATAATAATTATGAACTCAGGGTTCATGTTTGCTTACCAGGAAGCCAAGTTCCAGGATGGTTCAGCTATAGAACAACCGAAACTTGCATGACTGTTGAACTTGTCCTACTTGCTTCTAGTATCAGTATGTTCCGAGGTTTCATCTTCTGTGCTGTTCTTCCTCCTAGAGAGGAAAAAGGCTTAGGCTCGGAAAGTTTGAAATGTTCTTACTTCATTGAAACGAGTGATGGTCCAAGCGTGCGTGATCAGAGTTCGTGGGTGATATATGACCGTGCAGTTGATAAGGAATCTGACAATGTGTATATGTGGTATGATAGGCAATGCTGCATTGATATGATGAGGAGAACGAAACAAGACAAAGTAAGTGATGAAGATAATGTTCATAAGTACAAGGTATTATTTGATTTCCATTACTCCCTTAATTCCACAGGAATAAAAGAGTGTGGTGTCCATCCAATATAT	2826	0.3277	MHRNDAEFIEEIVKHVLQRLNQEYQCDPKEFVGIHEPIVELELVLCRESKAVLVVGLWGMGGIGLHSSNFGNDAEFIEEIVKRVLQRLNQAYQCDPKEFVGIHEPIAELESVLCRESKAVLVVGLWGMGGIGKTTLASNIFNRLQYEFQGVCFLENVRERVQRYGMTHLKKELLSKLLEEKDVVPFIMPDGITNFAKRRLSRKAILLVLDDVNDPDQLEDLCGRGFEWFGPTTRIIVTTRDKHVLLVKQVDHIHEVKPLNDDESLKLFNLNAFKQNYDIERDQDHAELAMKLVTYANGIPLALKVLGSSLYGRSKEEWESQLSKLEKIPHVKIQNILRVSYNDLDRHDQNIFLYIACFFETDNAEQIKCLLDSCGYSTAIGLRNLHDKALISIAPKSMAMHDLIRDMGREVVREESPSNPGNRSRLWDPVDIYEVLKYNRGTETIESITLDMSKIDMLSLHPQIFARMYKLKFLNVHSWDGEHRLCAPHGIESLSDELRFFQWEDYPSKSLPLSFCAENLVEIIMPSSQLEKLWEGVQNLVNLKLVDLNYSSHLVELPDFSKAPNLEEVNVSNCKSLQQVPQSVLSSQKLGYLFLNDCNELRSFQHNIHHQSLKTLSFHSCIGLREFSLTQLNHGTDKLVLSAPLERLKLDYCSNLSLLPDNISMLSSLKDLSMCHSSVRSLPESIKHLSRLKYLNLSNCEKLQSIPELPLSILVLIAVNCTSLHTVFMAEPIKEENFGYKTFAFTNCVKLEKATIQAIMANAYVRIQQAANAWLPTAQRNEYYYANFDNNYELRVHVCLPGSQVPGWFSYRTTETCMTVELVLLASSISMFRGFIFCAVLPPREEKGLGSESLKCSYFIETSDGPSVRDQSSWVIYDRAVDKESDNVYMWYDRQCCIDMMRRTKQDKVSDEDNVHKYKVLFDFHYSLNSTGIKECGVHPIY	942

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g01093	942	Pfam	C-JID domain	800	942	IPR045344	-
	Adu08g01093	942	Gene3D	-	258	345	IPR042197	-
	Adu08g01093	942	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	656	875	-	-
	Adu08g01093	942	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	656	875	IPR044974	GO:0006952
	Adu08g01093	942	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	3	64	IPR044974	GO:0006952
	Adu08g01093	942	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	69	664	IPR044974	GO:0006952
	Adu08g01093	942	Gene3D	-	77	253	IPR027417	-
	Adu08g01093	942	Gene3D	Ribonuclease Inhibitor	436	641	IPR032675	-
	Adu08g01093	942	PRINTS	Disease resistance protein signature	122	137	-	-
	Adu08g01093	942	PRINTS	Disease resistance protein signature	199	213	-	-
	Adu08g01093	942	PRINTS	Disease resistance protein signature	687	703	-	-
	Adu08g01093	942	PRINTS	Disease resistance protein signature	296	310	-	-
	Adu08g01093	942	Pfam	NB-ARC domain	108	345	IPR002182	GO:0043531
	Adu08g01093	942	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	87	355	IPR027417	-
	Adu08g01093	942	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	3	64	-	-
	Adu08g01093	942	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	69	664	-	-
	Adu08g01093	942	Gene3D	Ribonuclease Inhibitor	642	773	IPR032675	-
	Adu08g01093	942	Pfam	Leucine Rich Repeat	519	538	IPR011713	-
	Adu08g01093	942	SUPERFAMILY	L domain-like	400	725	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g01093	Adu-Chr8	19705515	19796481	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu08g01093	72	720	WRKY Transcription Factor Family	AT4G12020	33.776	1.52e-98	338

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g01093	-		-	aip:107613764	1482.23