Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01081 ATGGAGCCTCGCATTGCCAACAAGTTCCGTCTTGGCCGCAAGCTCGGTAGCGGATCATTCGGGGAGATCTATCTCGGGACTAACGTTCAGACCAATGAAGAAGTTGCAATTAAGCTTGAAAGTATCAAAACCAAGCATCCTCAGCTGTTGTATGAATCAAAGCTGTACAAAATACTACAAGGAGGAACTGGGATCCCAAATTTGAAATGGTTTGGTGTTGAGGGAGAATACAACGTCCTTGTTATAGATTTGCTGGGTCCTAGCCTCGAGGACTTATTCAATTTCTGTAGTCGGAAATTGTCCCTGAAAACTGTTCTCATGCTTGCTGATCAGATGATAAATCGAGTTGAATTTATCCATTCCAAATCTTTTTTACATAGGGACATCAAGCCAGACAACTTCCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTATGCCATTGACTTTGGTCTTGCTAAGAAATACAGAGACAGCTCTACCCATCAGCATATTCCATATAGAGAGAATAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGACGACTTAGAGTCGCTTGGATTTGTTCTTATGTATTTTTTGAGAGGAAGTCTTCCATGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTATGATAAAATTAGTGAGAAGAAAGTTTCTACTTCCATTGAGTCTCTCTGCCGTGGCTATCCCTCAGAATTCGCTTCATATTTCCATTACTGTCGGTCACTGCGATTTGATGATAAACCAGATTACGCTTATTTGAAAAGGCTTTTCCGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATCTTGAAATATCAGCAATCTCAAATTGCCTCTCCTCCCGTTCGTCCTGTTGGTCTTCCCCCAGGGCCAAGTTCTGGCTTGCCACCAGCTGCTTTGAATGCTGATAGACACTCGGGTGGAGAAGATGGTAGGCATACTGGTTTGTCTTCATCAGATCCTACTCGTAGAAGGCACTCTGGACCTATTGCAAATGATGGAAACTTATCCAGACAAAAGGCCCCTGTTACAAATGACACTACTAGATCCAAAGATGGGATGTTGTCTAGTTCTAATTTCTTTCGGTCAAGTGGATCTACAAGAAGAGTGGCTTTCTCAGGCGGTCGTGAAGCGGCAGTTGGCAGTGGTACTGAACACTCCCGTTCTCAGACCCTGGATGCAAATCCAGGAGCACTCCGGAAAATATCTGGTGCCCAGAAGAATGCACCTATCATCTCTTCTGAGCACACCCGGGCACCTTCTGGCATAACCACATCAAACATAAGGAATTTTGAGTCAACTCTTAGAGGACATGAAATACCGAATGCATATTGTTTATGGAAAGCTGCAACATGTTTGGAGTCGTCACTATAA 1443 0.4345 MEPRIANKFRLGRKLGSGSFGEIYLGTNVQTNEEVAIKLESIKTKHPQLLYESKLYKILQGGTGIPNLKWFGVEGEYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIASPPVRPVGLPPGPSSGLPPAALNADRHSGGEDGRHTGLSSSDPTRRRHSGPIANDGNLSRQKAPVTNDTTRSKDGMLSSSNFFRSSGSTRRVAFSGGREAAVGSGTEHSRSQTLDANPGALRKISGAQKNAPIISSEHTRAPSGITTSNIRNFESTLRGHEIPNAYCLWKAATCLESSL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01081 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Adu08g01081 480 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01081 480 MobiDBLite consensus disorder prediction 355 383 - -
Adu08g01081 480 PANTHER CASEIN KINASE-RELATED 1 452 - -
Adu08g01081 480 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Adu08g01081 480 MobiDBLite consensus disorder prediction 304 383 - -
Adu08g01081 480 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 452 IPR030509 GO:0004672|GO:0005524
Adu08g01081 480 MobiDBLite consensus disorder prediction 328 343 - -
Adu08g01081 480 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01081 480 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Adu08g01081 480 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01081 480 Gene3D Transferase(Phosphotransferase) domain 1 1 305 - -
Adu08g01081 480 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01081 Adu-Chr8 19582555 19587315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01081 7 223 EF-hand Containing Proteins AT2G17890 27.111 2.11e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Adu08g01081 Pkinase 8.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01081 K02218 - gmx:100778165 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01081 08 19582555 19587315 Adu09g00556 09 7056949 7061102 PCT