Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01080 ATGCTGAAGAAACCCGCAATTCTTCTCCTAGATGAGGCGACAAGTGCGTTGGACTCCGAGTCAGAAAAGCTTGTGCAAGAAGCACTTGATAAGTTTATGATTGGTAGAACAACACTTGTGATTGCACACCGCCTTTCCACGATTCGCAAAGCTGACCTTGTTGCAGGACTTCAGCAAGGAAGTGTATCAGAAATTGGAACTCATGATGAGCTATTCGTCAAAGGCGAAAATGGAGTCTATGCCAAGCTTATCAGGATGCAAGAGGCTGCCCATGAAACTGCCATGAGTAATGCTAGAAAGAGCAGTGCAAGTCTTTCCATTGATGCATCACATCCAAATTACAAGCTCGAAAAGCTTGCCTTCAAAGAGCAAGCCAGTTCCTTTTGGAGACTTGCAAAGGTGAACTCTCCTGAATTGCTCTATGCTTTGATTGGTTCTATAGCATTTCCTCTGGGATATTGTTGGGAAAATCTCACAAAACGAGTGAGGGAGAAAATGTTCAGTGCAGTGCTCAAGAACGAAATGGCATGGTTCGATCAGGAAGAAAATGAGAGTGCTAGAATTGCAGCAAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATTGA 618 0.4401 MLKKPAILLLDEATSALDSESEKLVQEALDKFMIGRTTLVIAHRLSTIRKADLVAGLQQGSVSEIGTHDELFVKGENGVYAKLIRMQEAAHETAMSNARKSSASLSIDASHPNYKLEKLAFKEQASSFWRLAKVNSPELLYALIGSIAFPLGYCWENLTKRVREKMFSAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGD 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01080 205 Pfam ABC transporter transmembrane region 149 205 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu08g01080 205 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 151 205 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu08g01080 205 Gene3D ABC transporter type 1, transmembrane domain 103 148 IPR036640 GO:0005524|GO:0016021
Adu08g01080 205 Gene3D ABC transporter type 1, transmembrane domain 149 204 IPR036640 GO:0005524|GO:0016021
Adu08g01080 205 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 156 205 IPR039421 -
Adu08g01080 205 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 111 IPR039421 -
Adu08g01080 205 SUPERFAMILY ABC transporter transmembrane region 151 204 IPR036640 GO:0005524|GO:0016021
Adu08g01080 205 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 156 205 - -
Adu08g01080 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 87 IPR027417 -
Adu08g01080 205 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 1 111 - -
Adu08g01080 205 Gene3D - 2 102 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01080 Adu-Chr8 19569187 19570235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01080 1 205 Calmodulin-binding Proteins AT2G36910 61.204 1.94e-101 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01080 K05658 - gmx:100777382 309.686