Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01079 ATGTTGGTTGCTTGCACTGCAGGGTTTGTACTACAGTGGCGCCTTGCTCTCGTCCTTGTTGCCGCCTTCCCAGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTTGAAGCTGCTCATGCTAAGGCCACACAACTTGCTGGGGAGGCTATAGCCAATGTAAGGCTTGTTGCAGCCTTTAATTCGGAAAAGAAAATCGTAGGACTTTTTGTCTCAAACCTTGAAATTCTGCTGCGACGCTGCTTTTGGAAGGGACAAATTTCTGGAAGTGGATATGGAATAGCACAGTTTGCACTCTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCACGGAATATCTGACTTCTCTAAAACAATCCGAGTTTTTATGGTCCTCATGGTCTCGGCTAATGGTGCTGCTGAAACTTTAACTCTGGCTCCTGACTTCATCAAGGGGGATAGAGCCATGAGGTCTGTTTTTGAACTCCTTGACCACAGAAACGAAATTGAGCCGGATGATTCTGATGCTACACCTGTTCCTGACCGGCTTCGTGGAGAAGTTGAGCTGAAGCATGTTTACTTCTCTTACCCGTCTCGGCCGGATATGCCTGTTTTCCGGGACCTCAGTCTTCGTGCAAGAGCAGGTAAAACTCTAGCCCTTGTAGGGCCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTTATCCAGACGTTCTATGATCCATCTTCGGGGCGAGTCATGATTGATGGAAAGGACATAAGGAAATGCAACCTTAAGTCCTTAGGAAGGCACATTGCTGTGGTGCCGCAAGAACCATGCTTGTTTGCTACTTCAATATATGAAAACATTGCTTATGGCCATGACTCGGCTACTGAAGCCGAGATCATTGAGGCTGCTACTCTTGCCAACGCACACAAGTTCATATCCGGCCTGCCTGAAGGATACAAAACATTTGTTAGGGAGAGAGGAGTTCAGCTATCAGGAGGACAAAAGCAAAGAATAGCTATTGCTAGAGCTTTTGTGAGGAAGGCAGAACTCATGCTTCTCGATGAAGCAATAAGTGCACTAGATGCTGAATCCGAGAGGTCTGTGCAGGAGGCTCTAGACCGAGCTTGCATCGGAAAAACAACCATCATAGTAGCGAAGAATCCCCCTGATGGGATCTATGCAAGAATGATTCAGTTACAAAGATTCTCAAACAACCAAGTCATTGGTGTTGCCTCAAGTTCAAGCTCCTTAACAAGACCAAACGATGATCAAAGGGAAAGCTAG 1290 0.4651 MLVACTAGFVLQWRLALVLVAAFPVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRLVAAFNSEKKIVGLFVSNLEILLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGDRAMRSVFELLDHRNEIEPDDSDATPVPDRLRGEVELKHVYFSYPSRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQTFYDPSSGRVMIDGKDIRKCNLKSLGRHIAVVPQEPCLFATSIYENIAYGHDSATEAEIIEAATLANAHKFISGLPEGYKTFVRERGVQLSGGQKQRIAIARAFVRKAELMLLDEAISALDAESERSVQEALDRACIGKTTIIVAKNPPDGIYARMIQLQRFSNNQVIGVASSSSSLTRPNDDQRES 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01079 429 ProSitePatterns ABC transporters family signature. 332 346 IPR017871 GO:0005524
Adu08g01079 429 Gene3D - 191 388 IPR027417 -
Adu08g01079 429 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 193 429 IPR003439 GO:0005524
Adu08g01079 429 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 157 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu08g01079 429 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 1 388 - -
Adu08g01079 429 Gene3D ABC transporter type 1, transmembrane domain 2 190 IPR036640 GO:0005524|GO:0016021
Adu08g01079 429 SMART AAA_5 220 414 IPR003593 -
Adu08g01079 429 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 388 IPR039421 -
Adu08g01079 429 Pfam ABC transporter transmembrane region 1 140 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu08g01079 429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 391 IPR027417 -
Adu08g01079 429 SUPERFAMILY ABC transporter transmembrane region 2 177 IPR036640 GO:0005524|GO:0016021
Adu08g01079 429 Pfam ABC transporter 212 359 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01079 Adu-Chr8 19567792 19569156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01079 1 424 Calmodulin-binding Proteins AT2G36910 78.462 0.0 705