Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01072 ATGGATCCTCACAAAGAGAGAATTAAGACTGGATGCCACAAAATCCTGGACGGAATAAACTCAATGTCTTTGGTGAATTTAGATGACCAGCAAGTTCATTCCTTGGTAATGATGAGAGAAATTGCACGCGGGGTTGTTGATGATCAAAATAGGAAGGTGACTAGGAATGATGTGATTCGTGCCTTGCGCCGCAGCATCTTGAAAATGGTGTGTGCATCGAGGGATATCATTCGATTATTGAGTAGGATGTCTTACGAAGGCTTGGATGACCAACAGATGAATTTATTGTTGAGAATGAACGAAATTGCTCATCGGATTATTGATAAACGGCCTAGAGTTGCAATAGCTAGGCCTAATTTACTTGTAGAACAAGTTGCACTTTTGGATGAAGGGATGAGAGATAGTCCTGTGGTTGAGTCGAGTAAGATCGGGGATGCTCTGATTGATGGGGCTCAAAGCATGAGTAATGATGATGATATGTTAGATGTGGAACATGTTTTAAGATTTGAAAATGGGATGAATGTTGCACAGGAGTCTCTATCGCCATCATGCTTCCAGCAATTTCTTCTGTGGCCTCCTGACGATTGCATCACTTTAGAATGGGTTCAGGATATGATGTCCACATTTGAGCATGTTTCACAGAAGGTGTTGCCATCTGCATTTTGTAATATTGTGCGAACCATTTTGGTGGATAAGTTGACAGATGCTGCTTCCAGTATTTTATGTGAGGAACCAAATTGTGTGGAGGTTGACTGTGAAGGAGAAGATTCAAGGGTCATCGTAGTAGGCGATATACATGGGCAGTTTCATGATTTATTGTCTCTCTTCAAGCATGCAGGAGTGCCCTCGGAGAGCCAATTTTATGTTTTCAATGGGAATTATGTAGGTAAAGGAGCTTGGGGCATTGAAGTACTTTTGGTCTTGCTAGCTTGGAAGGTGTTGATGCCTCACAGAATATATCTGCTCTGTGGAAATCATGAATCAAGATATTACACCGGAAGGTATGGTTTTGAGAACGAAGTATGGACCAAATATGGTAAACAAGGAGAATATGTATACAACAAATTTTTGGAGTGCTTCAAGGTGCTTCCGTTAGCTTCAGTTATAGCAAACTGTGTTTATACTACTCATGGAGGGTTTTTCCGTAGCAAACATTCTGCTCCTTCACGAAAGCCAAAACATAGGAAGACACAAAGGGTGGATCTTGGTTCTTTGGCTGAGTTATCTGAAGTTAAAAGAGCTCGTATTGGTTCCCCTTATGAAGGTCCTAATATATTATTGACTGACATCCTCTGGTCAAAACCATCTAAAAGGAATGGTCTAAGGGAGAATGCAGGTCGAAAGTATGGTTTATGGTGGGGTCCTGATTGCACCGAGGCTTTCTTAAAACGACACAATTTAAAGCTGATCATCAGATCACATGAAGGGCCTGATGCAAGGGCTGGTCAGGATGATTTTGGGAACATGATGATTGGATATAGCTTGGATCACGATGTAGAATCAGGAAAGCTATATACACTTTTTAGTGCTCCAGACTACCCACAGTTTGGTCAAAAGAGATATAATAATGAAGGAGCATATGCAATATTGCAGTCTCCAGATTTTGCAAGTCCTTCCTTTTTCTCATTCAAAGCTGCAGAAAGACCAACGGTGGATCCTTATGTTGATTCTGATGCTGATGAGATGGACTTGCCTGCGCCAAGTTCTTCCCAAATAGCCTCAACCTCTGCTTTCTGTGCTTCTCAAAGACCATATCCAGGTGGCTCGAGACCCATTTTTGATTTTAGTTTGTTGGGCATAGACAATGGACCATCTTGGAGCGTTGAGCTTGGAGATGGTTTAGGTGGCACTCAAGTTATGCAGGTTCCGAGGGCCCCCGTGGTGGAAGGCTTGCCGCTTCCTCCCAATATACAGGAGCCGCACCGGTCTGCGTACAAGTATTTGTTCGAGCTGGTTGGTGCATTGAAACATGTGGTTGTAACAAGGGAGACTGAGAACAGGGCCCGTGTGTCAGCATTGAGAAGCAGAGCCAAGAAACGAAAGGGAAGGAAGAGTAATAGTTGA 2064 0.4288 MDPHKERIKTGCHKILDGINSMSLVNLDDQQVHSLVMMREIARGVVDDQNRKVTRNDVIRALRRSILKMVCASRDIIRLLSRMSYEGLDDQQMNLLLRMNEIAHRIIDKRPRVAIARPNLLVEQVALLDEGMRDSPVVESSKIGDALIDGAQSMSNDDDMLDVEHVLRFENGMNVAQESLSPSCFQQFLLWPPDDCITLEWVQDMMSTFEHVSQKVLPSAFCNIVRTILVDKLTDAASSILCEEPNCVEVDCEGEDSRVIVVGDIHGQFHDLLSLFKHAGVPSESQFYVFNGNYVGKGAWGIEVLLVLLAWKVLMPHRIYLLCGNHESRYYTGRYGFENEVWTKYGKQGEYVYNKFLECFKVLPLASVIANCVYTTHGGFFRSKHSAPSRKPKHRKTQRVDLGSLAELSEVKRARIGSPYEGPNILLTDILWSKPSKRNGLRENAGRKYGLWWGPDCTEAFLKRHNLKLIIRSHEGPDARAGQDDFGNMMIGYSLDHDVESGKLYTLFSAPDYPQFGQKRYNNEGAYAILQSPDFASPSFFSFKAAERPTVDPYVDSDADEMDLPAPSSSQIASTSAFCASQRPYPGGSRPIFDFSLLGIDNGPSWSVELGDGLGGTQVMQVPRAPVVEGLPLPPNIQEPHRSAYKYLFELVGALKHVVVTRETENRARVSALRSRAKKRKGRKSNS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01072 687 SMART pp2a_7 225 547 IPR006186 GO:0016787
Adu08g01072 687 SUPERFAMILY Metallo-dependent phosphatases 220 553 IPR029052 -
Adu08g01072 687 Gene3D - 193 576 IPR029052 -
Adu08g01072 687 PRINTS Serine/threonine phosphatase family signature 258 285 IPR006186 GO:0016787
Adu08g01072 687 PRINTS Serine/threonine phosphatase family signature 288 315 IPR006186 GO:0016787
Adu08g01072 687 PRINTS Serine/threonine phosphatase family signature 321 345 IPR006186 GO:0016787
Adu08g01072 687 PRINTS Serine/threonine phosphatase family signature 358 384 IPR006186 GO:0016787
Adu08g01072 687 PRINTS Serine/threonine phosphatase family signature 503 519 IPR006186 GO:0016787
Adu08g01072 687 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 4 682 - -
Adu08g01072 687 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 4 682 - -
Adu08g01072 687 Pfam Calcineurin-like phosphoesterase 258 477 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01072 Adu-Chr8 19387881 19392037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01072 189 469 Calmodulin-binding Proteins AT5G63870 49.485 7.09e-90 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01072 K04460 - gmx:100779241 823.157