Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01069 ATGGGGCATCACTCTTGCTGCAACAAGCAGAAGGTCAAAAGAGGCCTTTGGTCACCAGAAGAAGATGAAAAACTCATCAACTACATCACCACCTATGGCCATGGTTGTTGGAGTTCTGTCCCTAAACTTGCAGGGTTGCAGAGGTGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTCAGACCTGATTTGAAACGTGGAAGCTTCTCTCCTCAAGAAGCAGCTCTCATTATTGACCTCCATAGCATTCTAGGCAACAGGTGGGCTCAGATTGCAAAGCACCTACCTGGAAGAACAGATAATGAGGTGAAAAACTTTTGGAATTCAAGCATCAAGAAGAAGCTTCTTTCCCATGATGTTCTTGTTCCTTCTTTGGCCACATTTTCTGATCATCATCATCATGGCCTTATTGCCAATAATAATGGTTCTTCCTTAGAAACTTTCTTCCCTGAAAACCCTATCCTAAACCCTCAGCTATACCTTCCAATAATCCCATCATCAATCCTTCAAGCTTTTGATCAACAAAATGTTATTGATATCAAGCAGCAGCAGCTTGATAACAATAACATTAATTATAACAATAATGGCAACAACTTCCATCACCATATTCAAATGCCTGCAGAAACAGTAGTAGTACCATCCATGAACACTACTGTTAATCCATCATCTTTGTATGAAGATACTTGGTCATCATCATCATCATTTGGATGTGTGCTACCTCTTCAAGAAGATCATCAGATTTCCAAAAATAGTAGTGATCATGATATTGCCATCACTGCTGCCACCCCATCAAACTATATTATTGATAAACTCATCATCAATAATCCAGTTAGTACTACATGGCAGCAGCATTTTGATCTTCATCACTTGATGGAACCAATTGTGCCAAAAGTCTGTGATATTAATAACACGAACATCATTGAGGATTATATTTGTGGCTTACCATATTCACCTGCTTCATCATCACAACAAGATCCTCTTGCTAGAATCCACTGTTACACCACTACTACTACTACTACTACACCTGCTTCTGCTGCTGCTATTTGTCCACAAGATCAAGCAACTCTTCTAGCTGCAAATCATCATCAATTGGAACAACAACACATTGATAATAATAATAATAATCCCCTCATCATTCCATCATCATTGCCATCATCAACATCTTCTTCATCAGCATCACTCTATCAAGCAGATCACATTTAG 1206 0.3889 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIDLHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDVLVPSLATFSDHHHHGLIANNNGSSLETFFPENPILNPQLYLPIIPSSILQAFDQQNVIDIKQQQLDNNNINYNNNGNNFHHHIQMPAETVVVPSMNTTVNPSSLYEDTWSSSSSFGCVLPLQEDHQISKNSSDHDIAITAATPSNYIIDKLIINNPVSTTWQQHFDLHHLMEPIVPKVCDINNTNIIEDYICGLPYSPASSSQQDPLARIHCYTTTTTTTTPASAAAICPQDQATLLAANHHQLEQQHIDNNNNNPLIIPSSLPSSTSSSSASLYQADHI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01069 401 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu08g01069 401 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu08g01069 401 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu08g01069 401 CDD SANT 17 61 IPR001005 -
Adu08g01069 401 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu08g01069 401 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Adu08g01069 401 MobiDBLite consensus disorder prediction 371 401 - -
Adu08g01069 401 Gene3D - 69 116 - -
Adu08g01069 401 Gene3D - 11 67 - -
Adu08g01069 401 PANTHER TRANSCRIPTION FACTOR MYB26 1 353 - -
Adu08g01069 401 CDD SANT 69 109 IPR001005 -
Adu08g01069 401 SMART sant 13 63 IPR001005 -
Adu08g01069 401 SMART sant 66 114 IPR001005 -
Adu08g01069 401 PANTHER MYB DOMAIN PROTEIN 55 1 353 - -
Adu08g01069 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu08g01069 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01069 Adu-Chr8 19372604 19374381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01069 1 118 MYB Transcription Factor Family AT3G13890 95.763 7.52e-81 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu08g01069 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01069 K09422 - gmx:102662609 381.333