Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01068 ATGATTGCTAGATTCCTTGTTGGGATTAATTGCGTGCCTCAACTACGTACGGCTTCAAGCTTCTGTTTCACACATTTGATCGTACTCTTTAGGAGCTTCATTTCTTGTGTGCTACCACCAAAGGGTTGTAAAGTTTGCTGCAAAGATTCACTATCAAAGCAAGATCTTCATCAATCTTCAAGCTCGTTACCAAGGAGAAGGAAGTTACAATATCTGAAGCTACCACCTACATTGTTCACGTTCCAATTTCTTGAATCCGTCATGAAATTGCAAGTGAAAGACGTGTGCAAGAAGCAACAACACCACCCCATTGATTTGTTACCGAAACCAGAAGCATGGTTATTGTCTTTTGAAGTTCTTCACGTGGCTGCAGTGAAGCTCCAGAAAGTTTACAGGAGTTACAGGACAAGAAGAAATCTCGCAGACTGCGCAATTGTCTGCGAGGAGCTTTGGTGGAAGGCTTCTGAATTTGCCGATAAAACAGAATCAGCTATATCAAAATGGAGAAGAGCCAGAGCCATGGCTGATGAGATGGGAAAAGAGTTTTCCAAAGATTATAAGGCGCAGAATTTGGCTCTAAGTCACTGGCTTGAAGCTATTGATCCACGTCATCGTTACGGCCACAACTTGCACTTTTATTACAACATCTGGTTTTGGAGCAAGAGTTCCCAACCCTTTTTTTACTGGCTGGATGTTGGAGATGGCAAGGAAGTTAACCTTGAAATATGCTTAAGAAAGAACTTGCAAAGGCAACGAATTACTTACCTTGGACCTGAGGAGAGGGAAGCATATGAGGTGATGATTGTGGAAGGAGGAAAACTGGTTTATAAGCAAAGCCAGAAACCTGTTCACACCACTGATGGGTCTAAGTGGATTTTTGTTCTTAGTCCATCAAGAATTTTGTATGTTGGTCAGAAAAAGAAAGGAGAATTCCAACATTCTAGTTTTCTAGCTGGAGCTGTTACCACTTCTTCTGGAAGATTAGTTGCCCATAATGGACTCATTGATGCTATTTGGCCCTACAGTGGTCATTACCGTCCAACAGCAAAGAATTTCTTGGAATTCTTACATTTCTTGGAAGCTCACCATGTTGATTTGACTAATGTCAAGAAATATCCGGTAGACGACGATGTGCCAAGTGAAGTGGGATCAAGTGAGTCACCAACAAATGAAAACTCAGCAATAATACAAGCAAGCAAGTGGAGCACTGGAGTTGGTCCAAGAATTGGTTGCATGACAGAGTACCCTAAAGAGCTGCAAGTGATGGCACTTGAGCACCTTGGAAGATTTGTTGGCATGGCACCCATTGCATCTCCAAGACCTACTCTCAAACTCCACCTCTCCCCTAAACTTGAGAAGGTTAGCTCTGATAACAAGAGTAAGAAGAAGTGGAAGATATGGAAGAACTCTCCGGAATTGAAGAAGGGTGCTACTGCTGTTGCTGATGCTTCTCACAAATCTGATTCTTCTTCCTTCACTTCTGCCATGGCTGCACTTGTTCGAGCTCCACCCAAAGATTTCAAGCTCATCAAGCATGAATGGGCTGCCATACGCATTCAGGCAGTCTTTCGAGCTTTTTTGGCTAGGAGAGCTTTGAGAGCCTTGAGGGCAGTGGTAAGGTTGCAAGCTATATTTCGAGGCCGGTTAGTTCGAAAGCAAGCGGTTGTTACTCTAAGGTGCATGCAGGCTCTTGTTAGAGTTCAGGCACGCGTAAGGGCAAGGAAAGTGAGGAACTCTCCAGAAGGGAAGGCAGTGCAGAAATTGTTGGATGAACATCGCAGCCTTGCTGATCCAGTTAAGCAGGCTGAGCAAGGATGGTGTGACATTCCTGGGACTGCAGATGAAGTTAAAGCAAAGCTGAGAATGAGGCAGGAAGGAGCCATCAAAAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGCATTCAAGAGGGTGTGCTAGTCCAAACTCAAGAGCCTCTAAGGCAGAGGCAATGACTCATTTCAAGCATCAGAACCTAGACAATAAGAGCTTAGGAAGCAGCTTGTTAGAACACTGGATGGCATCAAAGCCATGGGAGAGTCCAATGTCCAAGAAAAGTGATGATCACATTGTTCAATCAAGAAGGAATGGTGTGACAACCAGGATCTCAGTGAAATCTCTTCCAACAAGTCATTCGACTCCATCGTCTTCGGCGATAAGCTCTGATTGCATGTATGATGATAGCCCTGCATCAACATGCACATCAGAGGAAAGAGATGTTGTTCATAAGCCTAGCTACATGAATTTGACAAAATCAACCAAGGCAAAATTGAAGGCTTGCAGGAGTTCTTCACAGAATTCAAAGGATTCTTGTGTGTCTCATAGCACAACACTTGTGAATGGAGATGCTAGTAACAGTGCTGTTTCTGATCCATCAGTTAACTTGTGGAATGGTCTTTGTTCAACACCTCTAAGGGCAAGTTATCAAAGAAGATATGGTAGGAGCCTAGGAGGTAGATAA 2484 0.4372 MIARFLVGINCVPQLRTASSFCFTHLIVLFRSFISCVLPPKGCKVCCKDSLSKQDLHQSSSSLPRRRKLQYLKLPPTLFTFQFLESVMKLQVKDVCKKQQHHPIDLLPKPEAWLLSFEVLHVAAVKLQKVYRSYRTRRNLADCAIVCEELWWKASEFADKTESAISKWRRARAMADEMGKEFSKDYKAQNLALSHWLEAIDPRHRYGHNLHFYYNIWFWSKSSQPFFYWLDVGDGKEVNLEICLRKNLQRQRITYLGPEEREAYEVMIVEGGKLVYKQSQKPVHTTDGSKWIFVLSPSRILYVGQKKKGEFQHSSFLAGAVTTSSGRLVAHNGLIDAIWPYSGHYRPTAKNFLEFLHFLEAHHVDLTNVKKYPVDDDVPSEVGSSESPTNENSAIIQASKWSTGVGPRIGCMTEYPKELQVMALEHLGRFVGMAPIASPRPTLKLHLSPKLEKVSSDNKSKKKWKIWKNSPELKKGATAVADASHKSDSSSFTSAMAALVRAPPKDFKLIKHEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAVVTLRCMQALVRVQARVRARKVRNSPEGKAVQKLLDEHRSLADPVKQAEQGWCDIPGTADEVKAKLRMRQEGAIKRDRAMAYSLSTQHSRGCASPNSRASKAEAMTHFKHQNLDNKSLGSSLLEHWMASKPWESPMSKKSDDHIVQSRRNGVTTRISVKSLPTSHSTPSSSAISSDCMYDDSPASTCTSEERDVVHKPSYMNLTKSTKAKLKACRSSSQNSKDSCVSHSTTLVNGDASNSAVSDPSVNLWNGLCSTPLRASYQRRYGRSLGGR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01068 827 ProSiteProfiles IQ motif profile. 512 540 IPR000048 GO:0005515
Adu08g01068 827 ProSiteProfiles IQ motif profile. 536 563 IPR000048 GO:0005515
Adu08g01068 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 500 555 IPR027417 -
Adu08g01068 827 Pfam IQ calmodulin-binding motif 514 533 IPR000048 GO:0005515
Adu08g01068 827 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Adu08g01068 827 Pfam IQ calmodulin-binding motif 536 553 IPR000048 GO:0005515
Adu08g01068 827 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 49 382 IPR044159 -
Adu08g01068 827 SMART iq_5 511 533 IPR000048 GO:0005515
Adu08g01068 827 SMART iq_5 534 555 IPR000048 GO:0005515
Adu08g01068 827 SMART iq_5 119 141 IPR000048 GO:0005515
Adu08g01068 827 Gene3D - 509 563 - -
Adu08g01068 827 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 394 456 - -
Adu08g01068 827 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 49 382 - -
Adu08g01068 827 ProSiteProfiles IQ motif profile. 120 149 IPR000048 GO:0005515
Adu08g01068 827 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 394 456 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01068 Adu-Chr8 19354642 19360273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01068 461 807 IQD Protein Family AT1G72670 47.493 1.35e-81 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01068 - - adu:107461326 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01068 08 19354642 19360273 Adu09g00518 09 6417868 6420795 PCT