Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01063 ATGGAAGCTGCCACCTACGAGTCTACGACTACGAATACAATGGCGAGCAAGAATTCAACCCAATTGCCAATCACCAACATTACGAAGCTATTCGTTGGAGGCATCTCTTGGGAGACTTCTGAAGAATCATTTTGTAAGTACTTCAACAATTACGGGGAAGTGATAGATTCAGTGATAATGATGAATAAACAGTCCGGAAGGCCTCGGGGCTTTGGCTTTGTAAAATTTGCTGATTCAGCTGTTGCAGATGAAGTTTTGTCACAGGAGCATACCATAGACGGCAGAGTGGTTGAAGTGAAGAGGACTGTCCCTAGGGAGGACACGGAAGTTACCGGAGTATTCAGAACAAAGAAGATCTTTGTTGGCGGATTACCCCAATCTTTGTTGGCAGAACTTGattgcacgtaa 408 0.4338 MEAATYESTTTNTMASKNSTQLPITNITKLFVGGISWETSEESFCKYFNNYGEVIDSVIMMNKQSGRPRGFGFVKFADSAVADEVLSQEHTIDGRVVEVKRTVPREDTEVTGVFRTKKIFVGGLPQSLLAELDCT 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01063 135 SUPERFAMILY RNA-binding domain, RBD 28 128 IPR035979 GO:0003676
Adu08g01063 135 Gene3D - 26 109 IPR012677 -
Adu08g01063 135 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 30 97 IPR000504 GO:0003723
Adu08g01063 135 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 11 128 - -
Adu08g01063 135 SMART rrm1_1 29 100 IPR000504 GO:0003723
Adu08g01063 135 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 104 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01063 Adu-Chr8 19330687 19331639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01063 30 97 C2H2 Transcription Factor Family AT2G19380 36.232 1.50e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01063 K12741 - gmx:100818080 165.236