Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01058 ATGTCAAACTTCACTCCACCACCACCAACTCAAACTCATGGCCAAGTTAATAAGAAGAAGAGAAGCCTCCCTGGTAACCCAGACCCTGATGCTGAAGTGATAGCGTTGTCACCGAAGACTCTGATGGCGACAAACAGATTCTTATGCGAGATCTGTGGGAAAGGGTTTCAGAGGGATCAGAATCTGCAGCTGCACAGAAGAGGCCACAACTTGCCGTGGAAGCTGAAGCAGAGAACGAAGACGGAGGTGGTGAGGAAGAAGGTGTACGTGTGCACCTCACCGGAATCAAGAAGCACTTTTGCAGGAAGCACGGCGAGAAGAAGTGGAAATGCGACAAGTGCTCTAAGAAGTACGCCGTTCAATCCGACTGGAAAGCTCACTCCAAAACCTGCGGCACTCGCGAGTACCGATGCGACTGCGGCACCCTCTTCTCAAGGAGGGACAGTTTTATCACGCACAGAGCGTTTTGTGATGCGCTTGCAGAAGAAAGCGCGAGAGCTGTGA 504 0.5159 MSNFTPPPPTQTHGQVNKKKRSLPGNPDPDAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTKTEVVRKKVYVCTSPESRSTFAGSTARRSGNATSALRSTPFNPTGKLTPKPAALASTDATAAPSSQGGTVLSRTERFVMRLQKKAREL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01058 167 MobiDBLite consensus disorder prediction 1 19 - -
Adu08g01058 167 Coils Coil 157 167 - -
Adu08g01058 167 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 69 IPR013087 -
Adu08g01058 167 MobiDBLite consensus disorder prediction 137 151 - -
Adu08g01058 167 MobiDBLite consensus disorder prediction 98 124 - -
Adu08g01058 167 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Adu08g01058 167 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 11 94 - -
Adu08g01058 167 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 11 94 - -
Adu08g01058 167 MobiDBLite consensus disorder prediction 98 153 - -
Adu08g01058 167 SUPERFAMILY beta-beta-alpha zinc fingers 45 70 IPR036236 -
Adu08g01058 167 MobiDBLite consensus disorder prediction 1 29 - -
Adu08g01058 167 Gene3D Classic Zinc Finger 43 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01058 Adu-Chr8 19215365 19216018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01058 15 91 IDZ Gene Family AT3G13810 83.117 1.41e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu08g01058 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01058 K25870 - han:110869300 155.221