Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01054 ATGAGCAAAAAGATCAGCACAACCTCACAGGCTTGCGCTGCTTGTAAGCACCAACGTAGGAAGTGTGGTCCTAACTGCATTCTCGCACCATATTTTCCTCACGATCGCCAAAAACAATTCCTTAACGCTCATAAATTGTTTGGAGTTGGAAGAATGACTGATCTCATCAAACCACTGGGTCCTACCGAGAGAAACATTGCCATGGAAACCATCATCTACGAATCTGAGATGCGAGCCTATGATCCTGTTAACGGTTGTTGTACAATGATTCAACAGCTTCAATCTGAGATTGAGTACCGTCAAGCTGAGCTTCAACTTGTTCTTCATCGTCTCGCCCTCTTCAAAGCTCAAGCGCAGCAGCAATCTTCGAGTTGCAACCAAGTTAATAATGTTGAAGGGATTCCATTTCAACCGGATCAATATTATGAAGCTACTAACATGGATAGCAATAGCTCCATTACGCATGAAGTGGATCTTAATGCATGGATGATGCAAAACTTGCAATCACCTGCGTTGTTATCACCTTTGACATTAACCAATGAGAATGAAAATGGCAATGTTGGAGTTGATGATAATAATGGCTATATTTATGATCAGAAGCCTATGCTTGACCTTGGTTTTAAAGAAACCAAATCAAATCATCAAACACCAGTGGAGGGCATGCATTATTCAGGGATGAAGCAAATTTACAATTTTCAAGATCAGGAACAGAAAGATTAA 720 0.4069 MSKKISTTSQACAACKHQRRKCGPNCILAPYFPHDRQKQFLNAHKLFGVGRMTDLIKPLGPTERNIAMETIIYESEMRAYDPVNGCCTMIQQLQSEIEYRQAELQLVLHRLALFKAQAQQQSSSCNQVNNVEGIPFQPDQYYEATNMDSNSSITHEVDLNAWMMQNLQSPALLSPLTLTNENENGNVGVDDNNGYIYDQKPMLDLGFKETKSNHQTPVEGMHYSGMKQIYNFQDQEQKD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01054 239 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Adu08g01054 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 166 - -
Adu08g01054 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 7 166 - -
Adu08g01054 239 Pfam Lateral organ boundaries (LOB) domain 11 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01054 Adu-Chr8 19182537 19183458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01054 10 136 AS2 family AT3G13850 51.724 2.16e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu08g01054 LOB 3.6e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01054 08 19182537 19183458 Adu09g00500 09 6211995 6214093 PCT