Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01051 ATGATGGTGACTTGCTCAGAGCCATTGACAAACACACCTCCTGGATCTCCTTGTGGTTGTGTGTGGCCACTTCAAGTTAAACTCCACATCAGCATTGCAATATACAAGTTCTTCCCTTTGGTTTTCAAGCTAGCTGAGGAAATTGCAGCCAGTCTTTTGTTGAGTCGCAACCAGGTTCGCATTGTTGGAGCTAATGCAGCAAATCATCAACTAGAGAAAACCACTGTTCTCTTAAATTTGGTACCTCAAGGAGTTAAGTTTGATGATACAACAGCATTCTTGATATACAAGAAATTCTGGCACAAAGAAATTCTCACTGATGCTTCCCTTTTTGGTGCCTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCTTCTCCACCTTCAAGTCCTTTTGATGTTTCTGGTATAGTTGACCCAGATGCTGTTGGTAATGATGGGAATTTAATAAAGCCTTTAGGAGTTGATGTCTCTAATAAGAAGAAAAAAGAAGGGAATGGCGAAAGAACGGTTGGTATGCTCGTGTTGTCGTGTTTTGCAGCTTCTGTTCTGTTCCTTGGAGTTACTTGGCTTTGTCTATTGAAATGCCACTGTCCAGCCCTTGAAACTGAACAAGCTACAGATGTTATAATTGCACCCTCTTTCAAAAATTCAGGCATTGCCAGGTCATTGCCTTATGAGAACATGGTGAATTCTAGATCAACCTCAACCAATTCTGGAACAATAGCATATGCAGGATCAGCTAAGATATTCACTTTGAATgaaatagagaaagcaacaaatagcttcagttcttcaagaatattaggagaaggtggctttggccttgtttacaaaggaggcctacaagatgggagggatgttgcagtgaagattctCAAAAGGGATGATCATCATGGCGGCCGCGAATTTTTGGCCGAAGTTGAGATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATTGAGAAACAGAGTCGTTGCCTTGTCTATGAGCTTGTTCCTAATGGAAGTGTAGAATCCCACTTACATGGTTCAGACAAGGAAACAGGTCCACTTGATTGGGATGCACGGATGAAGattgcgcttggcgctgctcgaggattggcttatctgcatgaagattcaaatccatgtgtcatacatagagacttcaagtccagcaacatcttgttggaacatgacttcacacccaaggtatcagattttggattggcTAGAACAGCACTTGATGAGAGAAACAAGCACATTTCCACACATGTTATGGGCACATTTGGGTATCTAGCTCCTGAATATGCAATGACAGGACATCTTCTTGTGAAAAGTGATGTTTACAGTTATGGAGTAGTCCTCCTAGAGCTCCTAACCGGGAGAAAGCCTGTGGACTGGTCGCGATCGCCTGGTCAAGAATACCTTGTTGCTTGGGTTCGTCCGCTTCTCACAAGTAAAGAAGGTTTGGAGATGATTATAGACCCGGATATAAAGCACAGCATTTCTCTTGACAGCATACTAAAAGTCGCAGCCATTGCATCCATGTGTGTGCAAGAAGAAGTCACTCAACGCCCTTTCATGGGTGAAGTTGTGCAGGCCTTGAAGTTGGTATGCAGTGAGTTTGAGGAGACAGACTATGCAGGACAGGCAAGTTTTCAAGATGATGTACAAGGGAAATTTTCCAAAAGTTCAGATGAGAGAGTGGATTTTTCTGTGTAA 1728 0.3617 MMVTCSEPLTNTPPGSPCGCVWPLQVKLHISIAIYKFFPLVFKLAEEIAASLLLSRNQVRIVGANAANHQLEKTTVLLNLVPQGVKFDDTTAFLIYKKFWHKEILTDASLFGAYEVLYVHYPGLPPSPPSSPFDVSGIVDPDAVGNDGNLIKPLGVDVSNKKKKEGNGERTVGMLVLSCFAASVLFLGVTWLCLLKCHCPALETEQATDVIIAPSFKNSGIARSLPYENMVNSRSTSTNSGTIAYAGSAKIFTLNEIEKATNSFSSSRILGEGGFGLVYKGGLQDGRDVAVKILKRDDHHGGREFLAEVEMLSRLHHRNLVKLIGICIEKQSRCLVYELVPNGSVESHLHGSDKETGPLDWDARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDWSRSPGQEYLVAWVRPLLTSKEGLEMIIDPDIKHSISLDSILKVAAIASMCVQEEVTQRPFMGEVVQALKLVCSEFEETDYAGQASFQDDVQGKFSKSSDERVDFSV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01051 575 PANTHER OS01G0750732 PROTEIN 3 563 - -
Adu08g01051 575 Gene3D Phosphorylase Kinase; domain 1 235 339 - -
Adu08g01051 575 Pfam Protein tyrosine and serine/threonine kinase 267 537 IPR001245 GO:0004672|GO:0006468
Adu08g01051 575 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Adu08g01051 575 CDD STKc_IRAK 270 538 - -
Adu08g01051 575 Gene3D Transferase(Phosphotransferase) domain 1 340 561 - -
Adu08g01051 575 ProSiteProfiles Protein kinase domain profile. 264 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01051 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 386 398 IPR008271 GO:0004672|GO:0006468
Adu08g01051 575 PANTHER OS01G0750732 PROTEIN 3 563 - -
Adu08g01051 575 SUPERFAMILY Protein kinase-like (PK-like) 239 537 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01051 Adu-Chr8 19137351 19139885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01051 5 564 Receptor kinase-like Gene Family AT5G56890 61.672 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Adu08g01051 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01051 - - gmx:100814040 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01051 08 19137351 19139885 Adu09g00484 09 5783847 5787658 PCT