Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01037 ATGAGTCGAGAACAGCATAAGCGAGGGAAGGAAGAAAAAGGTTCAGATGGTGCTGAGAAGGTTATTGTTGCTGTTAAGGCATCAAAGGAAATTCCAAAGACAGCACTTGTTTGGTCTCTGACTCATGTTGTTCAACCTGGGGATTGCATTACACTAATAGTGGTTGTGCCTTCTTCACAAAGTTTTGGAAGAAGATTATGGGGTTTTCCAAGGTTTGCTGGTGACTGTGCCAACACCCAGAAGAAATCTCATTCACCAACTAGTTCAGAGCAGAAGAGTGAGATTACTGATTCTTTCTCTCAGATGATTCTTCAGCTCCATGACATCTATGATCCAAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCTAGAAAGGCCCAAGCCAATTGGGTTGTATTAGACAAGCAGCTAAAACAAGAAGAAAAGCAGTGTATGGAAGAGCTGCATTGCAACATTGTTGTTATGAAACAATCCCAAGCGAAAGTGCTCCGGTTGAATTTGATTGGATCACAAAAGAAGGATCTTGAAGAAGCAGCTCCATTACATTCCAAGCAAGATGGGAAGCTTGGAAGACAAGCCAAGAATAAGAATGATTCTTTGAGTTCCATAAAAGGAGCAGTTGTCACCCCAACTAGTAGTCCAGATGTAGGGACGCCTTCTACCGCGACTGAAGCCGGTACTTCATCTGTTTCAAGCTCTGATCCTGGAACTTCACCATTCTTTGTTTCTGAGATGAATAATGGTGAGTCAAAGAAAGAGGAAACTATTAAACAAAATGAAGAAGTTGATGCTAGTTCAGACTCAGATAGCGAAAAGTTGTCCCTATCCTCAGCAACCTTGAGATTCCAACCATGGATCAAAGATTTACTTTTATGCAAACAATCATCTCAATGCAGAGAAGAAGGATGCCATAGCAAGAATCAAACATCCACAGCTAGAGCTTTGATGGAAAAGTTCTCAAGGCTAGAAAGAGAAGCTGAAATGGAGATCTCAAGCCATATGAGTGAGTTGGATTTGAGTGGAAATGTAAGAGAAGCAATAACATTATCAAGAAATGCTCCACCTGGTCCACCTCCATTGTGTTCAATATGTCAACACAAGGCTCCTGTTTTTGGGAAACCTCCAAGGTGGTTCAGCTATGCCGAGTTGGAACTCGCTACGAGTGGATTCTCTCAAGCTAATTTcttggcagaagggggatttggctctgttcacagaggggccttacctgatggacaagtcattgctgtgaagcagcataaactggctagttctcagggtgatgttgaattttgctcagaggttgaagtcctcagctgtgctcagcatcgaaacgttgtaatgctcattggattctgtattgagaataagagaaggttgctggtttatgagtacatatgtaatggatctctggaCACTCACTTATATGGGAAAAAACAGGAACCATTAGAATGGTCAGCACGTCAAAGAattgccgtgggagctgctagaggcttgagatatcttcatgaggagtgcagagtaggctgcattatccaccgtgacatgcggccgaataacattctTATCACCCATGATTTTGAGCCACTGGTTGGTGATTTTGGGCTAGCAAGGTGGCAGCAACATAGAGACACTGGTGTTGAAACTAGAGTGATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACAGAAAAGGCTGATGTTTACTCCTTTGGGGTGGTATTGGTGGAGCTTGTTACCGGACGAAAAGCTGTCGATCTTAGCAGGCCGAAGGGGCAGCAATGTCTTACTGAATGGGCACGGCCATTGCTAGCAGAATATGCAATTGAGGAACTAATTGATCCAAGGTTGGGAAATAACTATGCAGAAAATGAGGTCAATTGCATGCTTCATGCAGCTTCATTATGCATGAGGAGAGATCCTTATTCCAGACCACGCATGTCACAGGTGCTCAGAATACTGGAGGGTGACATGATCATGGACACAAATTACATTACAGCTACCAATCCCACCACCACATAA 2073 0.3584 MSREQHKRGKEEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLIVVVPSSQSFGRRLWGFPRFAGDCANTQKKSHSPTSSEQKSEITDSFSQMILQLHDIYDPNKINVKIKIVSGSPCGAVAAEARKAQANWVVLDKQLKQEEKQCMEELHCNIVVMKQSQAKVLRLNLIGSQKKDLEEAAPLHSKQDGKLGRQAKNKNDSLSSIKGAVVTPTSSPDVGTPSTATEAGTSSVSSSDPGTSPFFVSEMNNGESKKEETIKQNEEVDASSDSDSEKLSLSSATLRFQPWIKDLLLCKQSSQCREEGCHSKNQTSTARALMEKFSRLEREAEMEISSHMSELDLSGNVREAITLSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATSGFSQANFLAEGGFGSVHRGALPDGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIENKRRLLVYEYICNGSLDTHLYGKKQEPLEWSARQRIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQQHRDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLSRPKGQQCLTEWARPLLAEYAIEELIDPRLGNNYAENEVNCMLHAASLCMRRDPYSRPRMSQVLRILEGDMIMDTNYITATNPTTT 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01037 690 CDD USP_Like 20 144 - -
Adu08g01037 690 Gene3D Transferase(Phosphotransferase) domain 1 477 684 - -
Adu08g01037 690 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Adu08g01037 690 PANTHER OS01G0253100 PROTEIN 16 684 IPR045271 GO:0004714|GO:0006468
Adu08g01037 690 MobiDBLite consensus disorder prediction 258 279 - -
Adu08g01037 690 CDD STKc_IRAK 407 673 - -
Adu08g01037 690 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Adu08g01037 690 SUPERFAMILY Protein kinase-like (PK-like) 385 676 IPR011009 -
Adu08g01037 690 MobiDBLite consensus disorder prediction 187 204 - -
Adu08g01037 690 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01037 690 MobiDBLite consensus disorder prediction 187 282 - -
Adu08g01037 690 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 684 - -
Adu08g01037 690 Pfam Protein tyrosine and serine/threonine kinase 405 670 IPR001245 GO:0004672|GO:0006468
Adu08g01037 690 MobiDBLite consensus disorder prediction 205 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01037 Adu-Chr8 18992332 18997327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01037 388 672 Trihelix Transcription Factor Family AT5G38560 54.110 5.69e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Adu08g01037 PK_Tyr_Ser-Thr 8.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01037 - - gmx:100789216 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01037 08 18992332 18997327 Adu09g00453 09 5331520 5337409 PCT