Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01035 ATGAGGACGATCAAAGAGTTTTTCTTGAGGCACTACTACTCTCTTTGGCTGTCACCATCACTATCACCACCGTCACACATGAATTCTAACGACGTAGAAAATCACAGAAACAGCGACGTCACCACAAAACAAATAAAGATCAACAAAGAGGAGGGAAGAGGCGAGTCATCCTCGATTTCCTCGTTCTTATGCGAAATCTGCATTGATACTAAAACCGAAGTAGAAAATTTCTCTATAACCGGTTGCAGCCACTCATATTGTACGGATTGCGTGGTGAAGTACGTTGGTTCTAAGCTTGACGACAACGTGATTAATATCTGGTGTCCGACTCCTCGGTGTGGTGGTTTCTTGGAACTCGACGGTTGCCGCGAGGTTCTACCAAAGATAGTTTTCGATCGATGGGATAAGTTATTGTGTGAAGCTGCTGTTGTTGAGAATGAGAGCGAGAGATTCATGTATTGCCCCTTCAAGGACTGCTCTGCCCTTATGATCGTCGACGATGATTCACCAACGGAATCAGAATGCCCTAGCTGTAATAGGCAGATCTGCGTCATGTGCGAGGCAGTTTGGCATCATGGGAGCACGTGCGAAGAATTTGGGAGGACATATAATGAATATAGAGTAGTGATGGAGGTAGCGGCCAGGAACCAGTGGATGAGGTGCCCAAACTGCAGATACAAAACTGCCATATAA 693 0.456 MRTIKEFFLRHYYSLWLSPSLSPPSHMNSNDVENHRNSDVTTKQIKINKEEGRGESSSISSFLCEICIDTKTEVENFSITGCSHSYCTDCVVKYVGSKLDDNVINIWCPTPRCGGFLELDGCREVLPKIVFDRWDKLLCEAAVVENESERFMYCPFKDCSALMIVDDDSPTESECPSCNRQICVMCEAVWHHGSTCEEFGRTYNEYRVVMEVAARNQWMRCPNCRYKTAI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01035 230 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 48 226 - -
Adu08g01035 230 ProSiteProfiles TRIAD supradomain profile. 60 230 IPR044066 -
Adu08g01035 230 SMART ibrneu5 132 196 IPR002867 -
Adu08g01035 230 ProSitePatterns Zinc finger RING-type signature. 82 91 IPR017907 -
Adu08g01035 230 Pfam Zinc finger, C3HC4 type (RING finger) 64 101 IPR018957 GO:0046872
Adu08g01035 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 144 IPR013083 -
Adu08g01035 230 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 48 226 IPR031127 GO:0004842|GO:0016567
Adu08g01035 230 SUPERFAMILY RING/U-box 146 199 - -
Adu08g01035 230 Pfam IBR domain, a half RING-finger domain 133 196 IPR002867 -
Adu08g01035 230 ProSiteProfiles Zinc finger RING-type profile. 64 112 IPR001841 -
Adu08g01035 230 SUPERFAMILY RING/U-box 61 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01035 Adu-Chr8 18946229 18947497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01035 64 225 C3H Transcription Factor Family AT2G19610 25.568 3.05e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01035 K11975 - gmx:100803898 199.904