Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01033 ATGGAAGAAGTAAAAGACTGCTGCTCCAGCAATACCACCGCCACGAGAAGCAGAGGAAGAAGAAGCAGCAGCACTGGCAGCTCTTCAGAGAAACGCAAACAGCAGCAGCAGCAGCAACAACAACAACAAGAAGAGAAGCCGTACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCGGAGATTAGAGAACCAAACAAGAGGTCAAGGATATGGCTGGGTTCATACACAACACCGGTGGCCGCCGCACGCGCCTACGACACCGCCGTGTTCTACCTGAGAGGACCATCTGCGCGCCTCAACTTCCCTGAGTTGTTGCTGCAAGAGCAAACCGAAGCCGTCGAAGGAGACATCACTGCCGATTCCATACGCAAAAGAGCCACACAGGTTGGTGCCAGAGTGGACGCCGCTCTTCAGGCCTCATCAAACTCTGTTAATTCCAGCCAGACCACTTCCGAAAAACCAGACTTGAACAAGGTTCCAAAATCCGAGGAAACTGAAGAAGATTCTCTTGACCAAGATTAA 528 0.5189 MEEVKDCCSSNTTATRSRGRRSSSTGSSSEKRKQQQQQQQQQQEEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLLQEQTEAVEGDITADSIRKRATQVGARVDAALQASSNSVNSSQTTSEKPDLNKVPKSEETEEDSLDQD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01033 175 SUPERFAMILY DNA-binding domain 47 105 IPR016177 GO:0003677
Adu08g01033 175 MobiDBLite consensus disorder prediction 139 157 - -
Adu08g01033 175 Gene3D AP2/ERF domain 47 105 IPR036955 GO:0003700|GO:0006355
Adu08g01033 175 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Adu08g01033 175 MobiDBLite consensus disorder prediction 1 50 - -
Adu08g01033 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 6 168 - -
Adu08g01033 175 MobiDBLite consensus disorder prediction 7 46 - -
Adu08g01033 175 MobiDBLite consensus disorder prediction 139 175 - -
Adu08g01033 175 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Adu08g01033 175 PRINTS Ethylene responsive element binding protein signature 86 106 IPR001471 GO:0003700|GO:0006355
Adu08g01033 175 CDD AP2 48 106 IPR001471 GO:0003700|GO:0006355
Adu08g01033 175 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Adu08g01033 175 Pfam AP2 domain 48 96 IPR001471 GO:0003700|GO:0006355
Adu08g01033 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 6 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01033 Adu-Chr8 18509917 18511162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01033 27 149 AP2-EREBP Transcription Factor Family AT1G46768 62.500 5.21e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu08g01033 AP2 3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01033 K09286 - jre:109020552 191.815