Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01004 ATGGAGACTCGTGCCGCCGCAAAGAGGAGGGCCATCACCGCAAACCTCACTGAGACTCAACCCCTCAAGAGGAAGCGCGTTGTGTTGGGTGAAATTACCAATTTTCCTACTGAAAATTTGAATACTCAGAAACCAAAATCCAAATGCCTCAACAATGCCAAGCCCAAGAAAGCCTCTGTCGCCGACAAGAACATGAAGGTTGTCAAGGAGAAAGAGAATGTGCTTGATGATGAAGATGACAAGCTCAATGTTGACCCTGTTGCCTCTGATATCTATCTGTACCTTCGGAAGATGGAGTTGGAGAAGAATAGAAGACCGAGAGTTGATTACCTTGAGAGGATTCAGAAAGATGTAACTGCGAACATGAGAGGGATTTTGGTGGATTGGTTAGTGGAAGTTGCAGAGGAATACAAGCTTCTCTCTGACACACTATATCTTTCAATTTCTTACATTGATAGGTATCTCTCCACGAATCGTGTCACCAAGCCTTATCTTCAGTTGCTCGGTGTTTCATCAATGCTCATTGCCGCGAAATATGAAGAGATTAATCCTCCTCATGTGGAGGAGTTCTGCTTTATCACTGATAACACATACAAGAAATCAGAGGTAGTGGAAATGGAAGCTAACATACTGAACTCTTTGAATTTTGAAATGGGTAGCCCAACTATTAAGACCTTTTTAAGGAGGTTTAATGAGATTGCTTGTGAGAGTCAAAAGGGTCAAAAGTTGCAGTTTGAGTTTCTGTGTTATTACCTTGCTGAACTAAGCTTGTTGGAATATGGATGTTTGAAGTTCTTGCCTTCTTTGGTGGCTGCTGCTGTTATATTTCTTGCTAGATTTATCATGTCGCCTAAATCGAACCCATGGACTTTAACCCTTTATGACCGCACTGGATATGATTCACTTCAGTTGAAAGAATGTGTTCTGATCTTACTTGACTTGTATTTGGGAAGAAGGGGAGCATGCTTCGAAGCTATTAGGAAGAAATACAAGCAGCATAAGTTCAAGTATGTGGCAAACTTTCCTTCCCCTCCCCAGATACCGAATTCATGCTTTGAAGATGACTTTTATGAAGAAAACTTTTATGAGTGA 1092 0.4139 METRAAAKRRAITANLTETQPLKRKRVVLGEITNFPTENLNTQKPKSKCLNNAKPKKASVADKNMKVVKEKENVLDDEDDKLNVDPVASDIYLYLRKMELEKNRRPRVDYLERIQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLSISYIDRYLSTNRVTKPYLQLLGVSSMLIAAKYEEINPPHVEEFCFITDNTYKKSEVVEMEANILNSLNFEMGSPTIKTFLRRFNEIACESQKGQKLQFEFLCYYLAELSLLEYGCLKFLPSLVAAAVIFLARFIMSPKSNPWTLTLYDRTGYDSLQLKECVLILLDLYLGRRGACFEAIRKKYKQHKFKYVANFPSPPQIPNSCFEDDFYEENFYE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01004 363 Gene3D - 106 219 - -
Adu08g01004 363 SUPERFAMILY Cyclin-like 221 346 IPR036915 -
Adu08g01004 363 SUPERFAMILY Cyclin-like 79 218 IPR036915 -
Adu08g01004 363 PANTHER CYCLIN-A3-1-RELATED 19 355 - -
Adu08g01004 363 Gene3D - 90 340 - -
Adu08g01004 363 Pfam Cyclin, C-terminal domain 221 343 IPR004367 -
Adu08g01004 363 Pfam Cyclin, N-terminal domain 90 218 IPR006671 -
Adu08g01004 363 PIRSF Cyclin_A_B_D_E 2 352 IPR039361 -
Adu08g01004 363 CDD CYCLIN 122 211 IPR013763 -
Adu08g01004 363 SMART cyclin_7 225 313 IPR013763 -
Adu08g01004 363 SMART cyclin_7 128 212 IPR013763 -
Adu08g01004 363 SMART Cyclin_C_2 221 344 IPR004367 -
Adu08g01004 363 PANTHER CYCLINS 19 355 IPR039361 -
Adu08g01004 363 CDD CYCLIN 221 312 IPR013763 -
Adu08g01004 363 ProSitePatterns Cyclins signature. 123 154 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01004 Adu-Chr8 18056879 18059141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01004 3 354 Core Cell Cycle Gene Families AT1G47230 52.925 2.36e-127 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01004 K06627 - pop:7472680 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01004 08 18056879 18059141 Adu08g01004 08 18056879 18059141 ECH