Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00990 ATGACAGCTTACCAGGTAATTATGGAGAAAAGAAGGACGAATTCCAGGGAGAGTGCAAAGTTTGCAGTGGTTGAAATTGACAGAAAGGAGAATGATGGCGAAGGCAGCGATTGGGATGGgaatgaggaacgaaagggaaaatgcaaggtagtaagtgacacaggaaagcgcaaaagtggcctcactacttcctCAACTCGCCAGCTGAAGGGACTTCATCACCAGTACCCATTTAGGACCAGTTTTCCGCAACCCTCAACCCCGGCACTCACCGGATCTGACCCATTCAGGACACAACGAATGGAACAGTCCATTGTGTTACAAAGAGACAGGAGTGGAATTTGGTGGGAGACTGTGACTATGCTGGTTTCTTTATTAGTAGAAACACAGAATGCTCAAGGCAGTATGACTAGAGTTGGACCCCACTCTGAAATGAGCTGCAACGGTTGCCGGGTGCTCCGCAAGGGATGCAGCGACATGTGCCCCCTGAGGACATGCCTTCACTGGATTCCATCCCCTCAGGCACAAGCTCACGCCACTCTCTTCCTCGCTAAGTTCTTTGGCCGCTCCGATCTCTTCTCCTTCATTTCCTCTGTCCCACACAACAACAGGCCCGAGCTGTTTCAGTCTCTGCTTTATGAAGCTTGCGGACGAACCATCAATCCCGTCAATGGCGCTGTGGGCCTGCTCTCCACTGGTAACTGGCACCTCTGCGAGGCCGCCCTCCGCACTGTCCTTGCCGGCGGCGTCCTCACCGCGTTGCCGGAGGAGGTCATCATGCCAGTCTTAGACGACTCTTCCGCTTCTCATGCTGCTCTTCATTTCAACAACACAAGCTTATCAGAGGCGTCCAAGAGGCGCAGCGTTAGCGGTGTTTCAACGCCACCCGCTGTGTCAGTTGTTTCGGGAGAACCATCGGAGATGACCTTGATGAGCTTTGATGATGGCATTTGCAGTCACAACCAGAGAAAACTCTTGAATCTTTTCGTGTAA 993 0.4844 MTAYQVIMEKRRTNSRESAKFAVVEIDRKENDGEGSDWDGNEERKGKCKVVSDTGKRKSGLTTSSTRQLKGLHHQYPFRTSFPQPSTPALTGSDPFRTQRMEQSIVLQRDRSGIWWETVTMLVSLLVETQNAQGSMTRVGPHSEMSCNGCRVLRKGCSDMCPLRTCLHWIPSPQAQAHATLFLAKFFGRSDLFSFISSVPHNNRPELFQSLLYEACGRTINPVNGAVGLLSTGNWHLCEAALRTVLAGGVLTALPEEVIMPVLDDSSASHAALHFNNTSLSEASKRRSVSGVSTPPAVSVVSGEPSEMTLMSFDDGICSHNQRKLLNLFV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00990 330 MobiDBLite consensus disorder prediction 28 54 - -
Adu08g00990 330 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 145 330 - -
Adu08g00990 330 MobiDBLite consensus disorder prediction 28 65 - -
Adu08g00990 330 Pfam Lateral organ boundaries (LOB) domain 146 242 IPR004883 -
Adu08g00990 330 ProSiteProfiles LOB domain profile. 145 251 IPR004883 -
Adu08g00990 330 PANTHER LOB DOMAIN-CONTAINING PROTEIN 145 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00990 Adu-Chr8 17861090 17865648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00990 145 256 AS2 family AT3G49940 71.429 1.11e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu08g00990 LOB 2.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00990 - - adu:107461241 399.438