Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00981 ATGCGGTGCAGGACATGCTGCAAGAGCTGTGGCTTCGATTGCCAAACTCATGTGAAGAGCACTTGGGTTCCCGCTTCCAAGCGCTGCGAGAGGCAGCAACAACTCACCTCTATCCAACAACAGCTTCTTGCTGCTGATGTTCCCAAGCGCCAAAGAGATCATGCCTGGTGGCTGGCAGCAGCAGAGGAGGAAGACGaaggatga 204 0.5343 MRCRTCCKSCGFDCQTHVKSTWVPASKRCERQQQLTSIQQQLLAADVPKRQRDHAWWLAAAEEEDEG 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00981 67 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 55 IPR007818 GO:0003700|GO:0006355
Adu08g00981 67 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 55 - -
Adu08g00981 67 Pfam Domain of unknown function (DUF702) 1 49 - -
Adu08g00981 67 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 1 28 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00981 Adu-Chr8 17668786 17668989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00981 1 53 C2H2 Transcription Factor Family AT5G66350 74.074 5.97e-22 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu08g00981 DUF702 4.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00981 - - adu:107462205 95.5153