Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00966 ATGGAGGACGCATTTGCCAGATCTATTCCCGAGGTCCTTGATCACTTTGGAGTCGACCCAACTAAAGGTCTATCAGATACCCAGGTAGTTCAACATGGTCGATTGTATGGTATAAACGTGCTGCCTGAAGATAAAAGAGCTCCTTTTTGGAAATTGGTTTTGAAGCAATTTGATGATTTGCTTGTGAAGATACTTATAGCAGCTGCAGTGATATCATTTATTCTGGCTTTAGTTAATGGAGAAACGGGCTTAATGGCATTTCTGGAGCCTTCTGTTATTCTATTGATATTAGCTGCAAATGCAGCTGTGGGGGTGATTACGGAAACAAATGCTGAAAAAGCTCTCGAGGAGCTGCGTGCCTATCAAGCTGATGTGGCAACTGTTCTGCGAAATGGTTGTTTTTCTATACTTCCAGCCACTGAACTTGTTCCTGGTGATATTGTGGAAGTTTCTGGTAAGCTGATTATGCAAATGAAATGCTTACAAACTAGCCGGTTTGTTTGCATAATCCTCAGCTCGGTGGAGAAAGAGCTTAAAACAACCACAACAACAAATGCTGTATACCAAGACAAGACAAATATTTTGTTCTCGGGAACAGTTATGGTTGCTGGTAGGGCAAGAGCTGTTGTGGTGGGAGTTGGTCCTAACACTGCCATGGGCAACATTCGTGATTCAATGATGCACACAGAGGATGAGGCGACACCATTGAAAAAGAAGCTGGATGAGTTTGGTACCTTTTTGGCGAAGGTTATTGCAGGGATTTGCGTATTGGTGTGGATTGTAAATATTGGTCATTTTCGTGACCCTGCTCATGGTGGTTTCTTGCGTGGTGCTATTCATTATTTTAAGTTTTGCAGTCAATCATGCTGGAGTCTTATTTTTCATGTACCATTTAATGTATTCTTCTATGCTTAA 915 0.4164 MEDAFARSIPEVLDHFGVDPTKGLSDTQVVQHGRLYGINVLPEDKRAPFWKLVLKQFDDLLVKILIAAAVISFILALVNGETGLMAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADVATVLRNGCFSILPATELVPGDIVEVSGKLIMQMKCLQTSRFVCIILSSVEKELKTTTTTNAVYQDKTNILFSGTVMVAGRARAVVVGVGPNTAMGNIRDSMMHTEDEATPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPAHGGFLRGAIHYFKFCSQSCWSLIFHVPFNVFFYA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00966 304 Pfam E1-E2 ATPase 122 273 - -
Adu08g00966 304 SUPERFAMILY Calcium ATPase, transduction domain A 124 225 IPR008250 -
Adu08g00966 304 SMART Cation_ATPase_N_a_2 3 77 IPR004014 -
Adu08g00966 304 Pfam Cation transporter/ATPase, N-terminus 8 72 IPR004014 -
Adu08g00966 304 Gene3D - 22 227 - -
Adu08g00966 304 Gene3D - 55 285 - -
Adu08g00966 304 PANTHER CALCIUM-TRANSPORTING ATPASE 3 285 - -
Adu08g00966 304 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 284 IPR023298 -
Adu08g00966 304 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 2 3 285 - -
Adu08g00966 304 Coils Coil 111 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00966 Adu-Chr8 17490557 17496201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00966 1 283 Primary Pumps ATPases(2) AT1G10130 76.792 6.11e-152 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00966 K05853 - gmx:100783509 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00966 08 17490557 17496201 Adu08g00966 08 17490557 17496201 ECH