Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00965 ATGGCTAGGTTGAATGCCATCGTTCGGTCTTTGCCTTCTGTTGAAACCTTGGGTTGCACCACTGTAATTTGCAGCGACAAAACTGGAACACTAACTACTAATATGATGTCAGTTGCAAAAGTATGCGTTGTTGAATCTGCACAACGTAGTCCTGCTGCTACTGAATACAGTGTCAGTGGGACAACATATGCACCTGAAGGCATAATTTTTGACAATACAGGGATGCAGATTGACTTTCCAGCTCAATTGCCGTGTCTTCTTCACATAGCAATGTGTTCTGCTCTTTGCAATGAATCAACCCTGCAGTATAATCCTGATAAGGGGAAGTATGAAAAAATTGGTGAGTCAACTGAAGTGGCACTACGTGTCTTTGCAGAAAAGGTTGGTCTTCCTGGTTTTAATTCTATGCCATCAGCCTTGAACATGTTGAGTAACCATGAACGTGCTTCTTATTGTAACCATTATTGGGAGGAACAATTTAGAAAGATGGATGTGCTGGAATTTTCTCGAGATCGGAAAATGATGAGTGTCCTTTGCAGCAGAAACCAATTGAATGTTTTGTTCTCTAAAGGTGCTCCAGAAAGCATAGTTGCTAGATGTACAACAATTCTGTGTAATGACGATGGCTCAATTGTGCCACTTACTGCTGATATTCGAGCAGAGCTGGCTTCAAGGTTCCATAGTTTTGCAGGAAAAGAAACATTGAGGTGCCTAGCTTTGGCTTTGAAATGGATGCCCTCAGGTCAACAGATGTTGTCCTTTGATGATGAGAGAGATCTTACATTTATTGGGTTGGTTGGGATGCTGGATCCACCAAGAGATGAAGTTAGAAATGCCATGCTTTCATGTATGACTGCTGGCATACGTGTTATAGTTGTCACTGGAGATAACAAGTCCACCGCTGAGTCCCTTTGCCGCAAGATAGGCGCTTTTGACCATATGATAGAATTTTCCGAGCGATCTTATACTGCTTCTGAGTTTGAAGAACTTCCACCACTGCAACAAACTCTAGCATTGCAACGTATGGCACTTTTTACCAGAGTTGAGCCTTCTCATAAAAGGATGCTGGTTGAAGCTTTGCAAAATCAGAATGAAGTGGTTGCAATGACGGGTGATGGAGTCAATGATGCACCTGCACTGAAAAAGGCAGATATAGGAATTGCTATGGGTTCTGGAACAGCTGTTGCCAAGAGTGCATCAGACATGGTGCTCGCTGATGACAACTTTGCTTCGATTGTTGCGGCTGTAGCAGAGGGTAGAGCTATATACAACAATACAAAACAGTTTATTAGATACATGATATCATCCAATATTGGTGAAGTAGTCTGTATATTTGTCGCTGCTGTGCTTGGGATACCTGATACTCTCGCTCCTGTCCAGCTGCTTTGGGTCAATTTGGTTACTGATGGACTGCCTGCCACTGCTATTGGCTTCAATAAGCAAGACTCTGATGTGATGAAGGCTAAGCCTCGAAAGGTGAATGAAGCAGTTGTGACAGGTTGGCTCTTCTTCCGTTATCTAGTAATTGGAGCTTATGTTGGCCTTGCAACCGTTGCTGGTTTTATTTGGTGGTTTGTTTATGCTGATAGTGGCCCCAAACTACCATATGTTGAACTGATGAATTTTGACACTTGCCCAACAAGGGAGACAACTTATCCATGCAGTATATTTGATGATCGACATCCATCTACTGTATCAATGACTGTGCTTGTCGTTGTTGAGATGTTCAATGCTTTAAACAACCTTAGTGAAAATCAATCTCTTTTGGTCGTTCCTCCCTGGAGTAACATGTGGCTTGTTGCTTCTATAATCATAACTATGCTTCTTCACATACTAATTTTATATGTTCACCCGCTGTCAGTTCTTTTCTCTGTAACACCATTATCCTGGGATGACTGGATGGTTGTCTTTTATCTTTCAATACCTGTTATAATTATTGATGAAGTATTAAAGTTCTTCTCCAGAAATCCCATTGGTTTGAGGTTCAGATTGTGGTTTAGGAGGTCCGACCTACTTCCAAAAAGAGAATCAAGGAGTTTAGGCAAGCATAATTACCTGCCGGGCCTTGTTGAGTGCAGTGCAGCCAAAGACAGAAAATCAGATAACAAAACTCGTGTTTAA 2121 0.4187 MARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKVCVVESAQRSPAATEYSVSGTTYAPEGIIFDNTGMQIDFPAQLPCLLHIAMCSALCNESTLQYNPDKGKYEKIGESTEVALRVFAEKVGLPGFNSMPSALNMLSNHERASYCNHYWEEQFRKMDVLEFSRDRKMMSVLCSRNQLNVLFSKGAPESIVARCTTILCNDDGSIVPLTADIRAELASRFHSFAGKETLRCLALALKWMPSGQQMLSFDDERDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHMIEFSERSYTASEFEELPPLQQTLALQRMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATVAGFIWWFVYADSGPKLPYVELMNFDTCPTRETTYPCSIFDDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVVPPWSNMWLVASIIITMLLHILILYVHPLSVLFSVTPLSWDDWMVVFYLSIPVIIIDEVLKFFSRNPIGLRFRLWFRRSDLLPKRESRSLGKHNYLPGLVECSAAKDRKSDNKTRV 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00965 706 Gene3D - 270 387 IPR023214 -
Adu08g00965 706 Pfam Cation transporting ATPase, C-terminus 454 653 IPR006068 -
Adu08g00965 706 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 1 659 - -
Adu08g00965 706 Gene3D - 34 269 IPR023299 GO:0000166
Adu08g00965 706 SUPERFAMILY HAD-like 257 418 IPR036412 -
Adu08g00965 706 PRINTS P-type cation-transporting ATPase superfamily signature 24 38 - -
Adu08g00965 706 PRINTS P-type cation-transporting ATPase superfamily signature 264 275 - -
Adu08g00965 706 PRINTS P-type cation-transporting ATPase superfamily signature 286 296 - -
Adu08g00965 706 PRINTS P-type cation-transporting ATPase superfamily signature 393 405 - -
Adu08g00965 706 PRINTS P-type cation-transporting ATPase superfamily signature 370 389 - -
Adu08g00965 706 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 655 IPR023298 -
Adu08g00965 706 ProSitePatterns E1-E2 ATPases phosphorylation site. 26 32 IPR018303 -
Adu08g00965 706 SFLD Haloacid Dehalogenase 5 422 - -
Adu08g00965 706 PANTHER CALCIUM-TRANSPORTING ATPASE 1 659 - -
Adu08g00965 706 Gene3D - 388 659 - -
Adu08g00965 706 PRINTS H+-transporting ATPase (proton pump) signature 370 386 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu08g00965 706 PRINTS H+-transporting ATPase (proton pump) signature 342 358 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu08g00965 706 PRINTS H+-transporting ATPase (proton pump) signature 401 426 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu08g00965 706 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 341 455 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu08g00965 706 Pfam haloacid dehalogenase-like hydrolase 262 384 - -
Adu08g00965 706 Pfam Cation transport ATPase (P-type) 94 203 - -
Adu08g00965 706 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 31 268 IPR023299 GO:0000166
Adu08g00965 706 SFLD p-type atpase 5 422 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00965 Adu-Chr8 17481136 17489406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00965 1 674 Primary Pumps ATPases(2) AT1G10130 83.828 0.0 1186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00965 K05853 - gmx:100783509 1269.22